RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 SYTL5Q8TDW5 730 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 SLC44A1Q8WWI5 657 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SNAPC3Q92966 411 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 TESCQ96BS2 214 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 FBXL18Q96ME1 805 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 COG8Q96MW5 612 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 MED15Q96RN5 788 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ZNF347Q96SE7 839 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 TEX12Q9BXU0 123 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 REXO4Q9GZR2 422 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 SPATC1LQ9H0A9 340 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 VPS11Q9H270 941 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 DPEP3Q9H4B8 488 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SLA2Q9H6Q3 261 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 LY9Q9HBG7 655 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 MRM3Q9HC36 420 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 CYP4F12Q9HCS2 524 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SDHAF3Q9NRP4 125 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 THG1LQ9NWX6 298 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 DNAJC28Q9NX36 388 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 COPG2Q9UBF2 871 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 REV1Q9UBZ9 1251 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CA14Q9ULX7 337 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PADI4Q9UM07 663 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PSMD13Q9UNM6 376 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 NAALADL1Q9UQQ1 740 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ERVK-19Q9WJR5 959 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CBY1Q9Y3M2 126 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 TESMINQ9Y4I5 508 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PCDHGB3Q9Y5G1 929 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CHD6Q8TD26 2715 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 A0A0G2JPF8 293 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 LOC100653049A0A140TA62 436 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SSU72P8A0A1W2PR75 194 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 HNRNPCL3B7ZW38 293 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 E7EWF7 191 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PHGDHO43175 533 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 DENRO43583 198 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 AP1G1O43747 822 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 LZTS3O60299 673 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 GMDSO60547 372 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SNAP91O60641 907 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 KRT34O76011 436 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ATE1O95260 518 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 FOSP01100 380 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 APOC1P02654 83 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SERPING1P05155 500 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 P4HBP07237 508 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 HNRNPCL4P0DMR1 293 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 GZMAP12544 262 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PLS3P13797 630 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ATF2P15336 505 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 TNNI1P19237 187 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CHRNA3P32297 505 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 MAN1A1P33908 653 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CAP2P40123 477 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 LIFRP42702 1097 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 NRIP1P48552 1158 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ACOT2P49753 483 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 COPAP53621 1224 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 AP2S1P53680 142 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 BPIFB3P59826 476 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CLCQ05315 142 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 LGALS3BPQ08380 585 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 IFRD2Q12894 506 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 BNIP2Q12982 314 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 MAPK7Q13164 816 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SLC13A2Q13183 592 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 GALEQ14376 348 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 DMC1Q14565 340 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 STAT4Q14765 748 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CLCA4Q14CN2 919 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 LLGL1Q15334 1064 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 FAM110CQ1W6H9 321 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PLA2G2CQ5R387 149 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 NT5DC1Q5TFE4 455 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CCDC137Q6PK04 289 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 SLC39A5Q6ZMH5 540 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CFAP77Q6ZQR2 320 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 KRT77Q7Z794 578 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 NEK8Q86SG6 692 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ZC3H7AQ8IWR0 971 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 CPNE9Q8IYJ1 553 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PM20D2Q8IYS1 436 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 DEFB107AQ8IZN7 70 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CMTR1Q8N1G2 835 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 PGBD3Q8N328 593 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PDPRQ8NCN5 879 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SIMC1Q8NDZ2 872 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ARL5BQ96KC2 179 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 C9orf72Q96LT7 481 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 APBA2Q99767 749 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SLC29A1Q99808 456 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SLC2A11Q9BYW1 496 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 TRIM8Q9BZR9 551 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 DCLK3Q9C098 648 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 NMUR2Q9GZQ4 415 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SLC6A17Q9H1V8 727 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SLC6A15Q9H2J7 730 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ELOVL6Q9H5J4 265 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms