RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 ATG2BQ96BY7 2078 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 SLC31A1O15431 190 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 IRAK2O43187 625 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 TJP3O95049 919 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 ERBB2P04626 1255 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 KRT7P08729 469 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 PIM1P11309 404 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 ADRA1DP25100 572 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 CSRP3P50461 194 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 PIGHQ14442 188 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 ZKSCAN8Q15776 578 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 CCDC6Q16204 474 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 PLEKHG6Q3KR16 790 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 BRMS1LQ5PSV4 323 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 WASHC2DQ5SRD0 308 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 RNF168Q8IYW5 571 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 SYNPOQ8N3V7 929 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 OR6Y1Q8NGX8 325 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 SLC44A1Q8WWI5 657 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 SORCS1Q8WY21 1168 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 ERP27Q96DN0 273 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 CELF6Q96J87 481 aaKnown RBP7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 C20orf27Q9GZN8 174 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 ZSCAN32Q9NX65 697 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 NOP53Q9NZM5 478 aaKnown RBP7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 BAIAP2L1Q9UHR4 511 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 HAO1Q9UJM8 370 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 COMMD10Q9Y6G5 202 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 SOBPA7XYQ1 873 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 TM9SF1O15321 606 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 PI15O43692 258 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 SNNO75324 88 aaPredicted RBP7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 ATP5HO75947 161 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 ZWINTO95229 277 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 IFNB1P01574 187 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 LINC00271P0C7V0 271 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 PRKCHP24723 683 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 SSTR1P30872 391 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 GPD2P43304 727 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 RPL34P49207 117 aaKnown RBP7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 SNRPD1P62314 119 aaKnown RBP7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 IL9RQ01113 521 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 GPS1Q13098 491 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 EIF4HQ15056 248 aaKnown RBP7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 SYPL2Q5VXT5 272 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 CAND1Q86VP6 1230 aaKnown RBP7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 ADGRG2Q8IZP9 1017 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 KIRREL3Q8IZU9 778 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 C4orf33Q8N1A6 199 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 FOXJ1Q92949 421 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 HAUS1Q96CS2 278 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 SLC32A1Q9H598 525 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 BATF3Q9NR55 127 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 SLC2A4RGQ9NR83 387 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 DDX56Q9NY93 547 aaKnown RBP7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 CORO1CQ9ULV4 474 aaPredicted RBP7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 STON1Q9Y6Q2 735 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 PATJQ8NI35 1801 aa7.46□□□□□ -1.21
CDC42BPA-208ENST00000442054 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 EXOC1LA0A1B0GW35 172 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 KRBA1A5PL33 1030 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 DIAPH2O60879 1101 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 DAB1O75553 588 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 RFPL1O75677 317 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 CBX6O95503 412 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 IGSF6O95976 241 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 STX2P32856 288 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 VPS41P49754 854 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 SCNN1BP51168 640 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 ECT2LQ008S8 904 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 CDK18Q07002 472 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 SPEM2Q0P670 501 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 KRT72Q14CN4 511 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 C11orf91Q3C1V1 193 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 BOLA3Q53S33 107 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 LYSMD4Q5XG99 296 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZNF776Q68DI1 518 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 PPIL6Q8IXY8 311 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 TTC30BQ8N4P2 665 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZMIZ2Q8NF64 920 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 KCTD13Q8WZ19 329 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 THOC1Q96FV9 657 aaKnown RBP7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 C1QTNF7Q9BXJ2 289 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 ARL8BQ9NVJ2 186 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 AP4E1Q9UPM8 1137 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 TLR6Q9Y2C9 796 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 DNAH12Q6ZR08 3092 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 PABPN1LA6NDY0 278 aaKnown RBP7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 CTSEP14091 401 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 PAX7P23759 505 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 CSKP41240 450 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 OTUD4Q01804 1114 aaKnown RBP7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 SPARCL1Q14515 664 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 TCEA2Q15560 299 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 TAF1BQ53T94 588 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 KCNT1Q5JUK3 1230 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 FOXB2Q5VYV0 432 aa7.46□□□□□ -1.22
CDC42BPA-208ENST00000442054 LINGO4Q6UY18 593 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms