RNA–Protein interactions for RNA: ENST00000441883.5

MRPL28-204, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-204ENST00000441883 ZSWIM9Q86XI8 627 aa27.32■■□□□ 1.96
MRPL28-204ENST00000441883 CAMK1DQ8IU85 385 aa27.32■■□□□ 1.96
MRPL28-204ENST00000441883 TP53INP2Q8IXH6 220 aa27.32■■□□□ 1.96
MRPL28-204ENST00000441883 ZNF641Q96N77 438 aaPredicted RBP27.32■■□□□ 1.96
MRPL28-204ENST00000441883 MRPL47Q9HD33 250 aaKnown RBP27.32■■□□□ 1.96
MRPL28-204ENST00000441883 CSNK1G3Q9Y6M4 447 aa27.32■■□□□ 1.96
MRPL28-204ENST00000441883 ALPPL2P10696 532 aa27.31■■□□□ 1.96
MRPL28-204ENST00000441883 TCF4P15884 667 aa27.31■■□□□ 1.96
MRPL28-204ENST00000441883 JUNDP17535 347 aa27.31■■□□□ 1.96
MRPL28-204ENST00000441883 PCK1P35558 622 aa27.31■■□□□ 1.96
MRPL28-204ENST00000441883 DPYSQ14117 519 aa27.31■■□□□ 1.96
MRPL28-204ENST00000441883 GRM3Q14832 879 aa27.31■■□□□ 1.96
MRPL28-204ENST00000441883 DCBLD1Q8N8Z6 715 aa27.31■■□□□ 1.96
MRPL28-204ENST00000441883 TRIM11Q96F44 468 aa27.31■■□□□ 1.96
MRPL28-204ENST00000441883 NCAPGQ9BPX3 1015 aa27.31■■□□□ 1.96
MRPL28-204ENST00000441883 TCEAL2Q9H3H9 227 aaPredicted RBP27.31■■□□□ 1.96
MRPL28-204ENST00000441883 PCDH12Q9NPG4 1184 aa27.31■■□□□ 1.96
MRPL28-204ENST00000441883 CLCA2Q9UQC9 943 aa27.31■■□□□ 1.96
MRPL28-204ENST00000441883 NBEAQ8NFP9 2946 aa27.31■■□□□ 1.96
MRPL28-204ENST00000441883 ANKRD36A6QL64 1941 aa27.31■■□□□ 1.96
MRPL28-204ENST00000441883 A0A1W2PQJ5 194 aa27.3■■□□□ 1.96
MRPL28-204ENST00000441883 ZNF135P52742 658 aaPredicted RBP27.3■■□□□ 1.96
MRPL28-204ENST00000441883 YPEL5P62699 121 aa27.3■■□□□ 1.96
MRPL28-204ENST00000441883 ELP6Q0PNE2 266 aa27.3■■□□□ 1.96
MRPL28-204ENST00000441883 RTP5Q14D33 572 aa27.3■■□□□ 1.96
MRPL28-204ENST00000441883 SRLQ86TD4 932 aa27.3■■□□□ 1.96
MRPL28-204ENST00000441883 SYN2Q92777 582 aaPredicted RBP27.3■■□□□ 1.96
MRPL28-204ENST00000441883 NSMCE3Q96MG7 304 aa27.3■■□□□ 1.96
MRPL28-204ENST00000441883 TUBGCP5Q96RT8 1024 aa27.3■■□□□ 1.96
MRPL28-204ENST00000441883 DUSP23Q9BVJ7 150 aa27.3■■□□□ 1.96
MRPL28-204ENST00000441883 COQ6Q9Y2Z9 468 aa27.3■■□□□ 1.96
MRPL28-204ENST00000441883 H3BM21 787 aa27.29■■□□□ 1.96
MRPL28-204ENST00000441883 RIOK3O14730 519 aaKnown RBP27.29■■□□□ 1.96
MRPL28-204ENST00000441883 AQP9O43315 295 aa27.29■■□□□ 1.96
MRPL28-204ENST00000441883 PALMO75781 387 aa27.29■■□□□ 1.96
MRPL28-204ENST00000441883 XPAP23025 273 aaPredicted RBP27.29■■□□□ 1.96
MRPL28-204ENST00000441883 IL10RBQ08334 325 aa27.29■■□□□ 1.96
MRPL28-204ENST00000441883 ACAP1Q15027 740 aa27.29■■□□□ 1.96
MRPL28-204ENST00000441883 COL28A1Q2UY09 1125 aa27.29■■□□□ 1.96
MRPL28-204ENST00000441883 RBFAQ8N0V3 343 aa27.29■■□□□ 1.96
MRPL28-204ENST00000441883 NXPE2Q96DL1 559 aa27.29■■□□□ 1.96
MRPL28-204ENST00000441883 NRSN2Q9GZP1 204 aa27.29■■□□□ 1.96
MRPL28-204ENST00000441883 BZW2Q9Y6E2 419 aaKnown RBP27.29■■□□□ 1.96
MRPL28-204ENST00000441883 DFFAO00273 331 aa27.28■■□□□ 1.96
MRPL28-204ENST00000441883 MUSKO15146 869 aa27.28■■□□□ 1.96
MRPL28-204ENST00000441883 MT-CO3P00414 261 aa27.28■■□□□ 1.96
MRPL28-204ENST00000441883 THOP1P52888 689 aa27.28■■□□□ 1.96
MRPL28-204ENST00000441883 UBASH3AP57075 661 aa27.28■■□□□ 1.96
MRPL28-204ENST00000441883 NSUN2Q08J23 767 aaKnown RBP eCLIP27.28■■□□□ 1.96
MRPL28-204ENST00000441883 IRF4Q15306 451 aa27.28■■□□□ 1.96
MRPL28-204ENST00000441883 DPYSL2Q16555 572 aa27.28■■□□□ 1.96
MRPL28-204ENST00000441883 WSCD2Q2TBF2 565 aa27.28■■□□□ 1.96
MRPL28-204ENST00000441883 CDCP2Q5VXM1 449 aa27.28■■□□□ 1.96
MRPL28-204ENST00000441883 BRAT1Q6PJG6 821 aa27.28■■□□□ 1.96
MRPL28-204ENST00000441883 LMX1AQ8TE12 382 aa27.28■■□□□ 1.96
MRPL28-204ENST00000441883 HNRNPLLQ8WVV9 542 aaKnown RBP27.28■■□□□ 1.96
MRPL28-204ENST00000441883 C1QTNF7Q9BXJ2 289 aa27.28■■□□□ 1.96
MRPL28-204ENST00000441883 SP110Q9HB58 689 aa27.28■■□□□ 1.96
MRPL28-204ENST00000441883 SCUBE2Q9NQ36 999 aa27.28■■□□□ 1.96
MRPL28-204ENST00000441883 ETNK2Q9NVF9 386 aa27.28■■□□□ 1.96
MRPL28-204ENST00000441883 OPA1O60313 960 aa27.27■■□□□ 1.96
MRPL28-204ENST00000441883 GCATO75600 419 aa27.27■■□□□ 1.96
MRPL28-204ENST00000441883 PRKCGP05129 697 aa27.27■■□□□ 1.96
MRPL28-204ENST00000441883 C6P13671 934 aa27.27■■□□□ 1.96
MRPL28-204ENST00000441883 AMPD1P23109 780 aa27.27■■□□□ 1.96
MRPL28-204ENST00000441883 EIF4A3P38919 411 aaKnown RBP27.27■■□□□ 1.96
MRPL28-204ENST00000441883 SEMG2Q02383 582 aa27.27■■□□□ 1.96
MRPL28-204ENST00000441883 PTK2BQ14289 1009 aa27.27■■□□□ 1.96
MRPL28-204ENST00000441883 RFTN1Q14699 578 aaPredicted RBP27.27■■□□□ 1.96
MRPL28-204ENST00000441883 BOLA3Q53S33 107 aa27.27■■□□□ 1.96
MRPL28-204ENST00000441883 TDRD12Q587J7 1177 aaKnown RBP27.27■■□□□ 1.96
MRPL28-204ENST00000441883 ZCCHC8Q6NZY4 707 aaKnown RBP27.27■■□□□ 1.96
MRPL28-204ENST00000441883 POLNQ7Z5Q5 900 aa27.27■■□□□ 1.96
MRPL28-204ENST00000441883 LZTR1Q8N653 840 aa27.27■■□□□ 1.96
MRPL28-204ENST00000441883 ECHDC3Q96DC8 303 aa27.27■■□□□ 1.96
MRPL28-204ENST00000441883 USP29Q9HBJ7 922 aa27.27■■□□□ 1.96
MRPL28-204ENST00000441883 CAPN11Q9UMQ6 739 aa27.27■■□□□ 1.96
MRPL28-204ENST00000441883 ATP8A1Q9Y2Q0 1164 aa27.27■■□□□ 1.96
MRPL28-204ENST00000441883 A0A087WV48 116 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 TOR1BO14657 336 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 TPP1O14773 563 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 MMP12P39900 470 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 LIG3P49916 1009 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 ZBED6P86452 979 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 LRRC14Q15048 493 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 AGERQ15109 404 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 SMTNL2Q2TAL5 461 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 DEFB133Q30KQ1 61 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 TXNRD3NBQ6F5E7 133 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 MACC1Q6ZN28 852 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 PHACTR4Q8IZ21 702 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 CPLX3Q8WVH0 158 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 BTN2A2Q8WVV5 523 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 PSKH2Q96QS6 385 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.26■■□□□ 1.95
MRPL28-204ENST00000441883 CINPQ9BW66 212 aaPredicted RBP27.26■■□□□ 1.95
MRPL28-204ENST00000441883 THAP2Q9H0W7 228 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 ATP13A3Q9H7F0 1226 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 SPASTQ9UBP0 616 aa27.26■■□□□ 1.95
MRPL28-204ENST00000441883 SALL4Q9UJQ4 1053 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms