RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 LDB2O43679 373 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 GREM1O60565 184 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 DNAJC6O75061 913 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 TMCC1O94876 653 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 CXCL14O95715 111 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 TOP3BO95985 862 aaKnown RBP13.26□□□□□ -0.29
CPSF4-206ENST00000441580 MYL2P10916 166 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 FGF3P11487 239 aaPredicted RBP13.26□□□□□ -0.29
CPSF4-206ENST00000441580 CPA3P15088 417 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 HOXA9P31269 272 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 LEPRP48357 1165 aaKnown RBP13.26□□□□□ -0.29
CPSF4-206ENST00000441580 AP1S1P61966 158 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 ARF5P84085 180 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 SPRED3Q2MJR0 410 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 MPPE1Q53F39 396 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 FAM91A1Q658Y4 838 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 TXNDC8Q6A555 127 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 MRNIPQ6NTE8 343 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 AFTPHQ6ULP2 937 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 ZYG11AQ6WRX3 759 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 HTR3DQ70Z44 454 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 GAREM2Q75VX8 874 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 C16orf59Q7L2K0 433 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 KDELC2Q7Z4H8 507 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 UBE2Q1Q7Z7E8 422 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 CILP2Q8IUL8 1156 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 MFN1Q8IWA4 741 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 DENND6AQ8IWF6 608 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 MICALL1Q8N3F8 863 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 FITM2Q8N6M3 262 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 ZNF557Q8N988 423 aaPredicted RBP13.26□□□□□ -0.29
CPSF4-206ENST00000441580 GPR150Q8NGU9 434 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 BLOC1S5Q8TDH9 187 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 ADAMTS19Q8TE59 1207 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 HERVK_113Q902F9 699 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 WBP2Q969T9 261 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 TMA16Q96EY4 203 aaKnown RBP13.26□□□□□ -0.29
CPSF4-206ENST00000441580 ELMO2Q96JJ3 720 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 TMEM120AQ9BXJ8 343 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 ADGRE3Q9BY15 652 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 LRRC3Q9BY71 257 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 MYLK2Q9H1R3 596 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 CAB39LQ9H9S4 337 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 NMRAL1Q9HBL8 299 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 HACD3Q9P035 362 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 TMEM216Q9P0N5 145 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 ZMYM5Q9UJ78 669 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 ZFP69BQ9UJL9 534 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 VPS28Q9UK41 221 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 ARHGAP26Q9UNA1 814 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 CHKBQ9Y259 395 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 SLC4A7Q9Y6M7 1214 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 ANKRD36A6QL64 1941 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 A0A0G2JND7 137 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 TLL1O43897 1013 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 ZMPSTE24O75844 475 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 SNUPNO95149 360 aaKnown RBP13.25□□□□□ -0.29
CPSF4-206ENST00000441580 AHSGP02765 367 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 CYBBP04839 570 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 PRKCGP05129 697 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 POU2F2P09086 479 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 DLDP09622 509 aaKnown RBP13.25□□□□□ -0.29
CPSF4-206ENST00000441580 SLC35E2BP0CK96 405 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 BMPR1AP36894 532 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 ABCG1P45844 678 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 ZNF140P52738 457 aaPredicted RBP13.25□□□□□ -0.29
CPSF4-206ENST00000441580 HK2P52789 917 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 LBX1P52954 281 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 EPHA5P54756 1037 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 NCALDP61601 193 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 IRX4P78413 519 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 OVGP1Q12889 678 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 GALNT3Q14435 633 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 TAF1AQ15573 450 aaPredicted RBP13.25□□□□□ -0.29
CPSF4-206ENST00000441580 ARHGAP15Q53QZ3 475 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 PPM1JQ5JR12 505 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 TMEM240Q5SV17 173 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 LRRC8EQ6NSJ5 796 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 FAM45BPQ6NSW5 357 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 RETSATQ6NUM9 610 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 C16orf46Q6P387 395 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 ELMSAN1Q6PJG2 1045 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 TBC1D1Q86TI0 1168 aaPredicted RBP13.25□□□□□ -0.29
CPSF4-206ENST00000441580 SLC41A1Q8IVJ1 513 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 WDR75Q8IWA0 830 aaKnown RBP13.25□□□□□ -0.29
CPSF4-206ENST00000441580 GPATCH11Q8N954 259 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 TDRD5Q8NAT2 981 aaKnown RBP13.25□□□□□ -0.29
CPSF4-206ENST00000441580 RFWD2Q8NHY2 731 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 TTC8Q8TAM2 541 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 FAM45AQ8TCE6 357 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 BADQ92934 168 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 ACDQ96AP0 544 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 SKA1Q96BD8 255 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 THOC1Q96FV9 657 aaKnown RBP13.25□□□□□ -0.29
CPSF4-206ENST00000441580 SLC22A12Q96S37 553 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 TASP1Q9H6P5 420 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 ECT2Q9H8V3 914 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 NOD2Q9HC29 1040 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 TLR9Q9NR96 1032 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 CFAP97Q9P2B7 532 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms