RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 TM7SF2O76062 418 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 MTA2O94776 668 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 ARHGAP25P42331 645 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 MAGEA1P43355 309 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 RXRGP48443 463 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 MAXP61244 160 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 SHC2P98077 582 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 ELP6Q0PNE2 266 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 PAFAH1B3Q15102 231 aaKnown RBP13.86□□□□□ -0.19
LTBR-202ENST00000440421 CCDC157Q569K6 752 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 BRAT1Q6PJG6 821 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 SLCO6A1Q86UG4 719 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 ZSCAN30Q86W11 494 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 SLC22A18ASQ8N1D0 253 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 BBS5Q8N3I7 341 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 PGBD5Q8N414 524 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 CHCHD4Q8N4Q1 142 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 EID2Q8N6I1 236 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 HCAR2Q8TDS4 363 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 LRRN4Q8WUT4 740 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 NSMCE3Q96MG7 304 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 CNTNAP3BQ96NU0 1288 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 CNTNAP3Q9BZ76 1288 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 INTUQ9ULD6 942 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 TFR2Q9UP52 801 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 COQ6Q9Y2Z9 468 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 HS3ST3A1Q9Y663 406 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 ANKRD36A6QL64 1941 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 CABIN1Q9Y6J0 2220 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 RIOK3O14730 519 aaKnown RBP13.85□□□□□ -0.19
LTBR-202ENST00000440421 KRT1P04264 644 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 ATXN1LP0C7T5 689 aaKnown RBP13.85□□□□□ -0.19
LTBR-202ENST00000440421 KDELR1P24390 212 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 HSPA9P38646 679 aaKnown RBP13.85□□□□□ -0.19
LTBR-202ENST00000440421 MMP13P45452 471 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 NOP2P46087 812 aaKnown RBP13.85□□□□□ -0.19
LTBR-202ENST00000440421 SUOXP51687 545 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 AP1S1P61966 158 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 GALNT2Q10471 571 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 SPA17Q15506 151 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 TMEM52BQ4KMG9 183 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 ZNF542PQ5EBM4 170 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 MARC1Q5VT66 337 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 ERAP2Q6P179 960 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 KYAT3Q6YP21 454 aaKnown RBP13.85□□□□□ -0.19
LTBR-202ENST00000440421 GLRX5Q86SX6 157 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 PQLC3Q8N755 202 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 PDCD6IPQ8WUM4 868 aaKnown RBP13.85□□□□□ -0.19
LTBR-202ENST00000440421 ASB12Q8WXK4 309 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 FAF2Q96CS3 445 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 LENG8Q96PV6 779 aaPredicted RBP13.85□□□□□ -0.19
LTBR-202ENST00000440421 SCNM1Q9BWG6 230 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 SCUBE2Q9NQ36 999 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 FTSJ1Q9UET6 329 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 WASF3Q9UPY6 502 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 APOBEC2Q9Y235 224 aaKnown RBP13.85□□□□□ -0.19
LTBR-202ENST00000440421 ATP8A1Q9Y2Q0 1164 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 PCDHGC4Q9Y5F7 938 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 PCDHA13Q9Y5I0 950 aa13.85□□□□□ -0.19
LTBR-202ENST00000440421 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.84□□□□□ -0.19
LTBR-202ENST00000440421 SOWAHDA6NJG2 315 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 A8MX80 341 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 TNFSF14O43557 240 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 SPOPO43791 374 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 CR2P20023 1033 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 COMTP21964 271 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 CYLC1P35663 651 aaPredicted RBP13.84□□□□□ -0.19
LTBR-202ENST00000440421 IGFALSP35858 605 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 GARSP41250 739 aaKnown RBP13.84□□□□□ -0.19
LTBR-202ENST00000440421 RABIFP47224 123 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 LIG3P49916 1009 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 GBE1Q04446 702 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 ITKQ08881 620 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 PDE1CQ14123 709 aaPredicted RBP13.84□□□□□ -0.19
LTBR-202ENST00000440421 LRRC49Q8IUZ0 686 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.84□□□□□ -0.19
LTBR-202ENST00000440421 DENND6BQ8NEG7 585 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 FAM174AQ8TBP5 190 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 RNF25Q96BH1 459 aaPredicted RBP13.84□□□□□ -0.19
LTBR-202ENST00000440421 CENPTQ96BT3 561 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 ECHDC3Q96DC8 303 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 RNF157Q96PX1 679 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 PANX2Q96RD6 677 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 NUDCD1Q96RS6 583 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 MGME1Q9BQP7 344 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 ANP32EQ9BTT0 268 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 C1QTNF7Q9BXJ2 289 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 GOLPH3Q9H4A6 298 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 NOD2Q9HC29 1040 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 NT5MQ9NPB1 228 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 MBNL1Q9NR56 388 aaKnown RBP13.84□□□□□ -0.19
LTBR-202ENST00000440421 DNAJC28Q9NX36 388 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 KLK13Q9UKR3 277 aa13.84□□□□□ -0.19
LTBR-202ENST00000440421 TRAFD1O14545 582 aaPredicted RBP13.83□□□□□ -0.2
LTBR-202ENST00000440421 LZTS3O60299 673 aaPredicted RBP13.83□□□□□ -0.2
LTBR-202ENST00000440421 TRIM16O95361 564 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 LCA5LO95447 670 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 LDOC1O95751 146 aaPredicted RBP13.83□□□□□ -0.2
LTBR-202ENST00000440421 C6P13671 934 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 MMP12P39900 470 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms