RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ASB12Q8WXK4 309 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 BMFQ96LC9 184 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 TSPY26PQ9H489 355 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 ZNHIT6Q9NWK9 470 aaKnown RBP20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 UCKL1Q9NWZ5 548 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 SEPT3Q9UH03 358 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 KNTC1P50748 2209 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 SPTY2D1-AS1A0A0U1RR47 76 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 CYP1A2P05177 515 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 RARAP10276 462 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 JUPP14923 745 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 TCF4P15884 667 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 AMPD1P23109 780 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 RENBPP51606 427 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 BCL2L1Q07817 233 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 ILKQ13418 452 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 FZD2Q14332 565 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 SMAD1Q15797 465 aaKnown RBP20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 UGP2Q16851 508 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 AFMIDQ63HM1 303 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 TMPRSS12Q86WS5 348 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 MARCH9Q86YJ5 346 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 CAMK1DQ8IU85 385 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 SLC25A45Q8N413 288 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 NIPA2Q8N8Q9 360 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 OR4C6Q8NH72 309 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 TEKT4Q8WW24 435 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 CTNNBL1Q8WYA6 563 aaPredicted RBP20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 CSPG4P5Q96PW8 444 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 KLF6Q99612 283 aaPredicted RBP20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 PCDH12Q9NPG4 1184 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 CTTNBP2NLQ9P2B4 639 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 ZZEF1O43149 2961 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 MYLKQ15746 1914 aa20.04■□□□□ 0.8
SHROOM1-204ENST00000440118 TRIM38O00635 465 aa20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 LZTS3O60299 673 aaPredicted RBP20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 NME1P15531 152 aaKnown RBP20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 JUNDP17535 347 aa20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 ITIH2P19823 946 aa20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 IGFALSP35858 605 aa20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 EIF4A3P38919 411 aaKnown RBP20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 SCNN1BP51168 640 aa20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 LBRQ14739 615 aaKnown RBP20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 ZFYVE27Q5T4F4 411 aa20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 HES3Q5TGS1 186 aa20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 SPECC1LQ69YQ0 1117 aa20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 POLNQ7Z5Q5 900 aa20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 ZNF548Q8NEK5 533 aaPredicted RBP20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 HCAR2Q8TDS4 363 aa20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 DUSP23Q9BVJ7 150 aa20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 NLGN3Q9NZ94 848 aa20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 ATP8A1Q9Y2Q0 1164 aa20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 COQ6Q9Y2Z9 468 aa20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 PKD1L2Q7Z442 2459 aa20.03■□□□□ 0.8
SHROOM1-204ENST00000440118 WDFY3Q8IZQ1 3526 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 TSPAN11A1L157 253 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 SRRM3A6NNA2 597 aaPredicted RBP20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 CSF2P04141 144 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 C6P13671 934 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 RGRP47804 291 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 CSNK1DP48730 415 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 CDH6P55285 790 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 AP1S1P61966 158 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 LRRC14Q15048 493 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 IRF4Q15306 451 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 PROX2Q3B8N5 592 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 TMEM52BQ4KMG9 183 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 KDM7AQ6ZMT4 941 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 RNF214Q8ND24 703 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 MDM1Q8TC05 714 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 TSC1Q92574 1164 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 ZNF599Q96NL3 588 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 PCDH18Q9HCL0 1135 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 GPR27Q9NS67 375 aa20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 APOBEC3BQ9UH17 382 aaKnown RBP20.02■□□□□ 0.8
SHROOM1-204ENST00000440118 APC2O95996 2303 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 AKR1B10O60218 316 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 NEBLO76041 1014 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 PRKCGP05129 697 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 ACP1P24666 158 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 HSPA9P38646 679 aaKnown RBP20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 MMP12P39900 470 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 CLDN6P56747 220 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 PFN3P60673 137 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 POLR2LP62875 67 aaKnown RBP20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 SEMG2Q02383 582 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 SLC25A11Q02978 314 aaKnown RBP20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 PROSER1Q86XN7 944 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 PDCD7Q8N8D1 485 aaKnown RBP20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 LMX1AQ8TE12 382 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 PDCD6IPQ8WUM4 868 aaKnown RBP20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 BTN2A2Q8WVV5 523 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 VOPP1Q96AW1 172 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 CENPTQ96BT3 561 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 IL12RB2Q99665 862 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 SLC13A1Q9BZW2 595 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 SPASTQ9UBP0 616 aa20.01■□□□□ 0.79
SHROOM1-204ENST00000440118 FAM208BQ5VWN6 2430 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 TRABD2BA6NFA1 517 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 TOR1BO14657 336 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms