RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ADRA1AP35348 466 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 ARSDP51689 593 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 INHBEP58166 350 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 SLC10A7Q0GE19 358 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 RBBP5Q15291 538 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 GPR158Q5T848 1215 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 RANBP10Q6VN20 620 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 C2CD4AQ8NCU7 369 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 IL12RB2Q99665 862 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 UBE2OQ9C0C9 1292 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 OSER1Q9NX31 292 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 E9PAM4 449 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 ACOT8O14734 319 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 MGEA5O60502 916 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 GPC4O75487 556 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 SUPT7LO94864 414 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 HAPLN1P10915 354 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 ATP5F1P24539 256 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 GPR15P49685 360 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 GEMP55040 296 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 PSME3P61289 254 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 DSC2Q02487 901 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 MAP2K5Q13163 448 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 FAM83EQ2M2I3 478 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 GDF6Q6KF10 455 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 ANKRD23Q86SG2 305 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 AMIGO2Q86SJ2 522 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 CUZD1Q86UP6 607 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 FAM110BQ8TC76 370 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 TREX1Q9NSU2 369 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 RRN3Q9NYV6 651 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 HS3ST4Q9Y661 456 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 A0A1W2PQH9 124 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 LRRC14BA6NHZ5 514 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 UBFD1O14562 309 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 CACNG3O60359 315 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 CNTN5O94779 1100 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 TBX18O95935 607 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 HMBSP08397 361 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 SMIM18P0DKX4 95 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 ODC1P11926 461 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 FASTKQ14296 549 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 GRM2Q14416 872 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 CYTH1Q15438 398 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 OVOS1Q6IE37 1185 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 POTEHQ6S545 545 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 SCD5Q86SK9 330 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 CIR1Q86X95 450 aaPredicted RBP13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 CNTN4Q8IWV2 1026 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 NAT14Q8WUY8 206 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 EME1Q96AY2 570 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 DNAJC1Q96KC8 554 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 TSGA13Q96PP4 275 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 TRIM8Q9BZR9 551 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 ABI2Q9NYB9 513 aaPredicted RBP13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 MARCH4Q9P2E8 410 aaPredicted RBP13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 PCDHGA7Q9Y5G6 932 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 SLCO1B7G3V0H7 640 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 FBP2O00757 339 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 UBDO15205 165 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 CLPTM1O96005 669 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 PAMP19021 973 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 CDKN2DP55273 166 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 DDR2Q16832 855 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 TMEM207Q6UWW9 146 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 PIWIL4Q7Z3Z4 852 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 METTL23Q86XA0 190 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 LRTOMTQ8WZ04 291 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 HDAC10Q969S8 669 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 CCDC28BQ9BUN5 200 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 CATSPERBQ9H7T0 1116 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 ENTPD7Q9NQZ7 604 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 TSC2P49815 1807 aa13.64□□□□□ -0.23
HERPUD1-204ENST00000439977 PRORSD1PA6NEY8 169 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 BCAS2O75934 225 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 IPO13O94829 963 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 TFAP2AP05549 437 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 COL6A2P12110 1019 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 XIAPP98170 497 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 MYBPC1Q00872 1141 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 BIRC2Q13490 618 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 SLC5A9Q2M3M2 681 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 RBM44Q6ZP01 1051 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 METTL25Q8N6Q8 603 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 HMCESQ96FZ2 354 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 LRCH3Q96II8 777 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 BTBD9Q96Q07 612 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 OCEL1Q9H607 264 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 SNX13Q9Y5W8 968 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 TRPC5OSA6NMA1 111 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 PSMD12O00232 456 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 PSMD3O43242 534 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 TADA2AO75478 443 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 SIX3O95343 332 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 PABPC4LP0CB38 370 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 GEN1Q17RS7 908 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 ALFQ53S48 1182 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 TECRLQ5HYJ1 363 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms