RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 GABRR2P28476 465 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 RGRP47804 291 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 ARSDP51689 593 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 PRKAA2P54646 552 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 PRAMEP78395 509 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 SLC7A9P82251 487 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 ARF5P84085 180 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 CTC1Q2NKJ3 1217 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 TSNAXIP1Q2TAA8 658 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 FBXW10Q5XX13 1052 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 TXNDC8Q6A555 127 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 ZYG11AQ6WRX3 759 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 C16orf59Q7L2K0 433 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 MTDHQ86UE4 582 aaKnown RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 TMC8Q8IU68 726 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 CENPLQ8N0S6 344 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 BRSK1Q8TDC3 778 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 SREK1Q8WXA9 508 aaKnown RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 MRPS31Q92665 395 aaKnown RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 ELMO2Q96JJ3 720 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 NUDCD1Q96RS6 583 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 CYP2S1Q96SQ9 504 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 MUC3BQ9H195 1237 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 LRMDAQ9H2I8 198 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 FAM96AQ9H5X1 160 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 STN1Q9H668 368 aaKnown RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 ZNF395Q9H8N7 513 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 NOD2Q9HC29 1040 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 ARHGEF3Q9NR81 526 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 CPQQ9Y646 472 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 NUMBLQ9Y6R0 609 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 ZBBXA8MT70 800 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 CBX4O00257 560 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 TRIM13O60858 407 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 RPP40O75818 363 aaKnown RBP11.85□□□□□ -0.51
SMAD3-202ENST00000439724 HAUS5O94927 633 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 FGBP02675 491 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 ADH1AP07327 375 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 SPATA31D3P0C874 917 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 T-ENOLP0DO92 83 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 HSPA8P11142 646 aaKnown RBP11.85□□□□□ -0.51
SMAD3-202ENST00000439724 NQO1P15559 274 aaKnown RBP11.85□□□□□ -0.51
SMAD3-202ENST00000439724 PSMA3P25788 255 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 SERPINB3P29508 390 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 KPNA2P52292 529 aaKnown RBP11.85□□□□□ -0.51
SMAD3-202ENST00000439724 TAS2R39P59534 338 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 ABCE1P61221 599 aaKnown RBP11.85□□□□□ -0.51
SMAD3-202ENST00000439724 PPIGQ13427 754 aaKnown RBP eCLIP11.85□□□□□ -0.511e-7■■□□□ 14
SMAD3-202ENST00000439724 ITGA9Q13797 1035 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 GALNT3Q14435 633 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 HSF5Q4G112 596 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-202ENST00000439724 CNSTQ6PJW8 725 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 SPATA31D4Q6ZUB0 917 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 GAREM2Q75VX8 874 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 PACS2Q86VP3 889 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 CILP2Q8IUL8 1156 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 CEP97Q8IW35 865 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 WDR75Q8IWA0 830 aaKnown RBP11.85□□□□□ -0.51
SMAD3-202ENST00000439724 CPXM2Q8N436 756 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 TMEM151AQ8N4L1 468 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 KLHL23Q8NBE8 558 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 GPR150Q8NGU9 434 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 PIWIL2Q8TC59 973 aaKnown RBP11.85□□□□□ -0.51
SMAD3-202ENST00000439724 BLOC1S5Q8TDH9 187 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 PPP4R1Q8TF05 950 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 STYXQ8WUJ0 223 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 KCTD4Q8WVF5 259 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 INPP5DQ92835 1189 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 HDAC10Q969S8 669 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 TMA16Q96EY4 203 aaKnown RBP11.85□□□□□ -0.51
SMAD3-202ENST00000439724 NSMCE3Q96MG7 304 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 SORT1Q99523 831 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 TDRD1Q9BXT4 1180 aaKnown RBP11.85□□□□□ -0.51
SMAD3-202ENST00000439724 TASP1Q9H6P5 420 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 SCUBE2Q9NQ36 999 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 FBXO6Q9NRD1 293 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-202ENST00000439724 LSM7Q9UK45 103 aaKnown RBP11.85□□□□□ -0.51
SMAD3-202ENST00000439724 DNAJC16Q9Y2G8 782 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 ZNF510Q9Y2H8 683 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 INSL6Q9Y581 213 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 OR51B4Q9Y5P0 310 aa11.85□□□□□ -0.51
SMAD3-202ENST00000439724 HELZP42694 1942 aaKnown RBP11.84□□□□□ -0.51
SMAD3-202ENST00000439724 ANKRD36A6QL64 1941 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-202ENST00000439724 TARM1B6A8C7 271 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 H0Y626 953 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 TRAFD1O14545 582 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-202ENST00000439724 AURKAO14965 403 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 LYPLA1O75608 230 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-202ENST00000439724 TMCC1O94876 653 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 KLHL2O95198 593 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 CXCL14O95715 111 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 CD160O95971 181 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 C8AP07357 584 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 SBK3P0C264 359 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 ALOX15P16050 662 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-202ENST00000439724 OGNP20774 298 aaKnown RBP11.84□□□□□ -0.51
SMAD3-202ENST00000439724 SAT1P21673 171 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 TARSP26639 723 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms