RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 GLMNQ92990 594 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 APOLD1Q96LR9 279 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 PEBP4Q96S96 227 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 SLC13A1Q9BZW2 595 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 NRSN2Q9GZP1 204 aa18.99■□□□□ 0.63
CCDC78-204ENST00000439619 TSPAN11A1L157 253 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 K7ESM1 405 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 INSIG1O15503 277 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 SPINT1O43278 529 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 LZTS3O60299 673 aaPredicted RBP18.98■□□□□ 0.63
CCDC78-204ENST00000439619 HTR1BP28222 390 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 RPIAP49247 311 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 ZBED6P86452 979 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 BCL2L1Q07817 233 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 NSUN2Q08J23 767 aaKnown RBP eCLIP18.98■□□□□ 0.63
CCDC78-204ENST00000439619 NFKBIBQ15653 356 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 BBS5Q8N3I7 341 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 LMX1AQ8TE12 382 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 NSMCE1Q8WV22 266 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 ZNF599Q96NL3 588 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 TRIM7Q9C029 511 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 CWC15Q9P013 229 aaKnown RBP18.98■□□□□ 0.63
CCDC78-204ENST00000439619 SEPT3Q9UH03 358 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 APOBEC3BQ9UH17 382 aaKnown RBP18.98■□□□□ 0.63
CCDC78-204ENST00000439619 IP6K2Q9UHH9 426 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 LUC7L2Q9Y383 392 aaKnown RBP18.98■□□□□ 0.63
CCDC78-204ENST00000439619 GPSM3Q9Y4H4 160 aa18.98■□□□□ 0.63
CCDC78-204ENST00000439619 CHD6Q8TD26 2715 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 TPP1O14773 563 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 NFKBIAP25963 317 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 PEX5P50542 639 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 INSM1Q01101 510 aaPredicted RBP18.97■□□□□ 0.63
CCDC78-204ENST00000439619 DPYSL2Q16555 572 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 FAXCQ5TGI0 409 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 AFMIDQ63HM1 303 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 TMCO3Q6UWJ1 677 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 MACC1Q6ZN28 852 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 CAMK1DQ8IU85 385 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 TSEN2Q8NCE0 465 aaKnown RBP18.97■□□□□ 0.63
CCDC78-204ENST00000439619 CPLX3Q8WVH0 158 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 SCG3Q8WXD2 468 aaKnown RBP18.97■□□□□ 0.63
CCDC78-204ENST00000439619 HSPH1Q92598 858 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 VOPP1Q96AW1 172 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 TBATAQ96M53 351 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 PCDH12Q9NPG4 1184 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 SCUBE2Q9NQ36 999 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 SALL4Q9UJQ4 1053 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 CAPN11Q9UMQ6 739 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 ATP8A1Q9Y2Q0 1164 aa18.97■□□□□ 0.63
CCDC78-204ENST00000439619 CFAP69A5D8W1 941 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 NEBLO76041 1014 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 MT-CO3P00414 261 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 ANXA6P08133 673 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 SERPINB6P35237 376 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 IGFALSP35858 605 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 HSPA9P38646 679 aaKnown RBP18.96■□□□□ 0.63
CCDC78-204ENST00000439619 EIF4A3P38919 411 aaKnown RBP18.96■□□□□ 0.63
CCDC78-204ENST00000439619 CLDN6P56747 220 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 AP1S1P61966 158 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 PPARDQ03181 441 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 ZNF235Q14590 738 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 PRRT3Q5FWE3 981 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 PHACTR4Q8IZ21 702 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 DCBLD1Q8N8Z6 715 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 TP53I13Q8NBR0 393 aaPredicted RBP18.96■□□□□ 0.63
CCDC78-204ENST00000439619 DEPDC7Q96QD5 511 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.96■□□□□ 0.63
CCDC78-204ENST00000439619 DOLKQ9UPQ8 538 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 ZZEF1O43149 2961 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 ZFHX4Q86UP3 3567 aa18.96■□□□□ 0.63
CCDC78-204ENST00000439619 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.95■□□□□ 0.62
CCDC78-204ENST00000439619 A0A1W2PQ67 120 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 MYO1FO00160 1098 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 OPA1O60313 960 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 GIMD1P0DJR0 217 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 C6P13671 934 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 CTSEP14091 401 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 ITIH2P19823 946 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 LIG3P49916 1009 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 SCNN1BP51168 640 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 SEMG2Q02383 582 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 EIF2B5Q13144 721 aaKnown RBP18.95■□□□□ 0.62
CCDC78-204ENST00000439619 DPYSQ14117 519 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 LBRQ14739 615 aaKnown RBP18.95■□□□□ 0.62
CCDC78-204ENST00000439619 RTP5Q14D33 572 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 IRF4Q15306 451 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 NR0B2Q15466 257 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 HADHQ16836 314 aaKnown RBP18.95■□□□□ 0.62
CCDC78-204ENST00000439619 SMTNL2Q2TAL5 461 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 HGSNATQ68CP4 663 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 C19orf48Q6RUI8 117 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 KDM7AQ6ZMT4 941 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 LRRC69Q6ZNQ3 347 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 CYP4V2Q6ZWL3 525 aaPredicted RBP18.95■□□□□ 0.62
CCDC78-204ENST00000439619 ARHGAP12Q8IWW6 846 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 NPWQ8N729 165 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 TPCN2Q8NHX9 752 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 MAPK15Q8TD08 544 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 TEKT4Q8WW24 435 aa18.95■□□□□ 0.62
CCDC78-204ENST00000439619 PSKH2Q96QS6 385 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms