RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 VPS36Q86VN1 386 aa20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 DCBLD1Q8N8Z6 715 aa20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 TP53I13Q8NBR0 393 aaPredicted RBP20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 TSEN2Q8NCE0 465 aaKnown RBP20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 APOLD1Q96LR9 279 aa20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 TUBGCP5Q96RT8 1024 aa20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 WRAP53Q9BUR4 548 aaKnown RBP20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 C1QTNF7Q9BXJ2 289 aa20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 MBNL1Q9NR56 388 aaKnown RBP20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 BZW2Q9Y6E2 419 aaKnown RBP20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 H3BM21 787 aa20.5■□□□□ 0.87
NCKIPSD-206ENST00000439518 TOR1BO14657 336 aa20.5■□□□□ 0.87
NCKIPSD-206ENST00000439518 IL1R2P27930 398 aa20.5■□□□□ 0.87
NCKIPSD-206ENST00000439518 YPEL5P62699 121 aa20.5■□□□□ 0.87
NCKIPSD-206ENST00000439518 BRAT1Q6PJG6 821 aa20.5■□□□□ 0.87
NCKIPSD-206ENST00000439518 SRLQ86TD4 932 aa20.5■□□□□ 0.87
NCKIPSD-206ENST00000439518 ZSWIM9Q86XI8 627 aa20.5■□□□□ 0.87
NCKIPSD-206ENST00000439518 CAMK1DQ8IU85 385 aa20.5■□□□□ 0.87
NCKIPSD-206ENST00000439518 NXPE2Q96DL1 559 aa20.5■□□□□ 0.87
NCKIPSD-206ENST00000439518 DUSP23Q9BVJ7 150 aa20.5■□□□□ 0.87
NCKIPSD-206ENST00000439518 PCDH12Q9NPG4 1184 aa20.5■□□□□ 0.87
NCKIPSD-206ENST00000439518 PNMA8BQ9ULN7 279 aaPredicted RBP20.5■□□□□ 0.87
NCKIPSD-206ENST00000439518 RIOK3O14730 519 aaKnown RBP20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 AQP9O43315 295 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 PALMO75781 387 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 MYF5P13349 255 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 TCF4P15884 667 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 JUNDP17535 347 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 XPAP23025 273 aaPredicted RBP20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 UBASH3AP57075 661 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 TPM4P67936 248 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 IL10RBQ08334 325 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 PTK2BQ14289 1009 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 RFTN1Q14699 578 aaPredicted RBP20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 RTP5Q14D33 572 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 DPYSL2Q16555 572 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 ARHGAP36Q6ZRI8 547 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 TP53INP2Q8IXH6 220 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 NRSN2Q9GZP1 204 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 USP29Q9HBJ7 922 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 CLCA2Q9UQC9 943 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 MYLKQ15746 1914 aa20.49■□□□□ 0.87
NCKIPSD-206ENST00000439518 IGSF10Q6WRI0 2623 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 DFFAO00273 331 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 OPA1O60313 960 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 SERPING1P05155 500 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 MMP12P39900 470 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 THOP1P52888 689 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 ZBED6P86452 979 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 NSUN2Q08J23 767 aaKnown RBP eCLIP20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 AGERQ15109 404 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 WSCD2Q2TBF2 565 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 BOLA3Q53S33 107 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 TDRD12Q587J7 1177 aaKnown RBP20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 ZCCHC8Q6NZY4 707 aaKnown RBP20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 C19orf48Q6RUI8 117 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 LZTR1Q8N653 840 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 BTN2A2Q8WVV5 523 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 ECHDC3Q96DC8 303 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 TBATAQ96M53 351 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 TCEAL2Q9H3H9 227 aaPredicted RBP20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 ATP13A3Q9H7F0 1226 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 SP110Q9HB58 689 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 SCUBE2Q9NQ36 999 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 CAPN11Q9UMQ6 739 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 ATP8A1Q9Y2Q0 1164 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 COQ6Q9Y2Z9 468 aa20.48■□□□□ 0.87
NCKIPSD-206ENST00000439518 ADAMTS20P59510 1910 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 A0A087WV48 116 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 H3BRJ5 948 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 TPP1O14773 563 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 MUSKO15146 869 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 GP1BAP07359 652 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 C6P13671 934 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 SERPINA4P29622 427 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 EIF4A3P38919 411 aaKnown RBP20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 LIG3P49916 1009 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 DUSP3P51452 185 aaPredicted RBP20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 PIGHQ14442 188 aaPredicted RBP20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 LRRC14Q15048 493 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 IRF4Q15306 451 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 CDCP2Q5VXM1 449 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 ERAP2Q6P179 960 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 MACC1Q6ZN28 852 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 POLNQ7Z5Q5 900 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 RBFAQ8N0V3 343 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 NIPA2Q8N8Q9 360 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 LMX1AQ8TE12 382 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 IQCDQ96DY2 449 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 NSMCE3Q96MG7 304 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 PSKH2Q96QS6 385 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 CINPQ9BW66 212 aaPredicted RBP20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 THAP2Q9H0W7 228 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 ZWILCHQ9H900 591 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 SALL4Q9UJQ4 1053 aa20.47■□□□□ 0.87
NCKIPSD-206ENST00000439518 ASXL3Q9C0F0 2248 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 A0A087X0T9 212 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 GCATO75600 419 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 MT-CO3P00414 261 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms