RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 TRAFD1O14545 582 aaPredicted RBP19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 KHNYNO15037 678 aaKnown RBP19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 SPINT1O43278 529 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 AP1G1O43747 822 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 TJP3O95049 919 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 PRKCGP05129 697 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 CFIP05156 583 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 GNSP15586 552 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 XPAP23025 273 aaPredicted RBP19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 HOXD12P35452 270 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 IRX4P78413 519 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 OTUD4Q01804 1114 aaKnown RBP19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 NIPAL4Q0D2K0 466 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 CCDC173Q0VFZ6 552 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 PRKD1Q15139 912 aaPredicted RBP19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 RPS6KA1Q15418 735 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 RALGPS1Q5JS13 557 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 PRPF39Q86UA1 669 aaKnown RBP19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 TRIM69Q86WT6 500 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 HORMAD1Q86X24 394 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 PAF1Q8N7H5 531 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 CNTD1Q8N815 330 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 TRIM58Q8NG06 486 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 CEP76Q8TAP6 659 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 ACTL9Q8TC94 416 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 FAM118BQ9BPY3 351 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 FSCN3Q9NQT6 498 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 TRMT1Q9NXH9 659 aaKnown RBP19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 SUSD2Q9UGT4 822 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 AMACRQ9UHK6 382 aa19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 ZFR2Q9UPR6 939 aaKnown RBP19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 ASCC3Q8N3C0 2202 aaKnown RBP19.65■□□□□ 0.74
SEMA3B-206ENST00000439487 A0A1B0GTW7 788 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 H7C0C1 242 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 NEMP1O14524 444 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 AREL1O15033 823 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 BCAT2O15382 392 aaPredicted RBP19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 ZSCAN12O43309 604 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 LATO43561 262 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 ATP5OP48047 213 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 TRAF2Q12933 501 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 IHHQ14623 411 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 NOMO1Q15155 1222 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 UGP2Q16851 508 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 SEL1L3Q68CR1 1132 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 NEK5Q6P3R8 708 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 SLC23A3Q6PIS1 610 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 BRAT1Q6PJG6 821 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 C12orf50Q8NA57 414 aaPredicted RBP19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 ARRDC2Q8TBH0 407 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 PDCD6IPQ8WUM4 868 aaKnown RBP19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 UBE2Q2Q8WVN8 375 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 ECHDC3Q96DC8 303 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 FEM1CQ96JP0 617 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 C10orf88Q9H8K7 445 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 HAUS2Q9NVX0 235 aa19.64■□□□□ 0.73
SEMA3B-206ENST00000439487 UPK3BL1B0FP48 263 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 HACD1B0YJ81 288 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 UPK3BL2E5RIL1 263 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 HTRA2O43464 458 aaPredicted RBP19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 TSPAN6O43657 245 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 SERPINF2P08697 491 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 PTPN3P26045 913 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 SEMG2Q02383 582 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 ZNF284Q2VY69 593 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 ALG1LQ6GMV1 187 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 RABEPKQ7Z6M1 372 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 SLC6A18Q96N87 628 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 AGAP3Q96P47 875 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 QKIQ96PU8 341 aaKnown RBP eCLIP19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 NUSAP1Q9BXS6 441 aaKnown RBP19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 TM9SF3Q9HD45 589 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 PCDH12Q9NPG4 1184 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 RXFP3Q9NSD7 469 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 TPX2Q9ULW0 747 aaKnown RBP19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 SLC6A14Q9UN76 642 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 SPTBN4Q9H254 2564 aa19.63■□□□□ 0.73
SEMA3B-206ENST00000439487 TCRBV7S2A1N4TA0A589 114 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 WNT9AO14904 365 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 SLC31A1O15431 190 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 SOCS5O75159 536 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 PRLRP16471 622 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 CES1P23141 567 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 RPS21P63220 83 aaKnown RBP19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 XRCC4Q13426 336 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 AASDHQ4L235 1098 aaPredicted RBP19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 TMEM259Q4ZIN3 620 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 SETMARQ53H47 684 aaPredicted RBP19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 TEX44Q53QW1 395 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 SLC45A4Q5BKX6 768 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 SEL1L2Q5TEA6 688 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 KIAA1161Q6NSJ0 714 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 SERAC1Q96JX3 654 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 TLR10Q9BXR5 811 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 CAPN10Q9HC96 672 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 PYCARDQ9ULZ3 195 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 PCDHB9Q9Y5E1 797 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 RAI2Q9Y5P3 530 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 DMXL1Q9Y485 3027 aa19.62■□□□□ 0.73
SEMA3B-206ENST00000439487 LNP1A1A4G5 178 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms