RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 HOXB2P14652 356 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 HSD17B3P37058 310 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 CXCR3P49682 368 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 COPAP53621 1224 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 NUP107P57740 925 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 CYP4F2P78329 520 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 GNA12Q03113 381 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 CNGA3Q16281 694 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 ATP13A4Q4VNC1 1196 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 GFM2Q969S9 779 aaKnown RBP12.17□□□□□ -0.46
NEK1-201ENST00000439128 GKN1Q9NS71 199 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 TBC1D30Q9Y2I9 924 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 A0A0U1RQF3 1178 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 GMFGO60234 142 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 CST3P01034 146 aaPredicted RBP12.17□□□□□ -0.46
NEK1-201ENST00000439128 RHOQP17081 205 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 TBL3Q12788 808 aaKnown RBP12.17□□□□□ -0.46
NEK1-201ENST00000439128 GPAT3Q53EU6 434 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 AGKQ53H12 422 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 C17orf64Q86WR6 236 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 BTBD1Q9H0C5 482 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 MORF4L1Q9UBU8 362 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 USP15Q9Y4E8 981 aaPredicted RBP12.17□□□□□ -0.46
NEK1-201ENST00000439128 FAM220BPB1ANY3 271 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 PECAM1P16284 738 aaPredicted RBP12.17□□□□□ -0.46
NEK1-201ENST00000439128 ZNF24P17028 368 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 LMO2P25791 158 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 TRIP4Q15650 581 aaPredicted RBP12.17□□□□□ -0.46
NEK1-201ENST00000439128 LRRC73Q5JTD7 316 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 FAM180AQ6UWF9 173 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 LCLAT1Q6UWP7 414 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 DPP10Q8N608 796 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 PXYLP1Q8TE99 480 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 TMEM237Q96Q45 408 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 ZNF232Q9UNY5 417 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 WNT6Q9Y6F9 365 aa12.17□□□□□ -0.46
NEK1-201ENST00000439128 OR2AG2A6NM03 316 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 BGNP21810 368 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 SSTR1P30872 391 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 LSP1P33241 339 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 WNT3AP56704 352 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 NOMO3P69849 1222 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 TRIM32Q13049 653 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 DLG2Q15700 870 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 TXNDC8Q6A555 127 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 C16orf62Q7Z3J2 963 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 PHF13Q86YI8 300 aaPredicted RBP12.16□□□□□ -0.46
NEK1-201ENST00000439128 CYB5D2Q8WUJ1 264 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 FIG4Q92562 907 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 FBXL18Q96ME1 805 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 CATSPER2Q96P56 530 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 ZIM3Q96PE6 472 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 RHOBTB2Q9BYZ6 727 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 PRRG3Q9BZD7 231 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 LHX5Q9H2C1 402 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 IKZF4Q9H2S9 585 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 FAM83DQ9H4H8 585 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 NMUR1Q9HB89 426 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 KCNE2Q9Y6J6 123 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 PIPSLA2A3N6 862 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 C16orf96A6NNT2 1141 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 CD3EAPO15446 510 aaKnown RBP12.16□□□□□ -0.46
NEK1-201ENST00000439128 SCN2BO60939 215 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 LTA4HP09960 611 aaKnown RBP12.16□□□□□ -0.46
NEK1-201ENST00000439128 CCDC166P0CW27 439 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 ETS1P14921 441 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 S100A3P33764 101 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 SPAM1P38567 509 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 UBE2R2Q712K3 238 aaPredicted RBP12.16□□□□□ -0.46
NEK1-201ENST00000439128 FAM20CQ8IXL6 584 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 CFAP206Q8IYR0 622 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 SUN3Q8TAQ9 357 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 ASZ1Q8WWH4 475 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 PABPC3Q9H361 631 aaKnown RBP12.16□□□□□ -0.46
NEK1-201ENST00000439128 ZSCAN5DPP0CG00 497 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 ARRB1P49407 418 aaPredicted RBP12.16□□□□□ -0.46
NEK1-201ENST00000439128 ACAP2Q15057 778 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 FGD3Q5JSP0 725 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 MIIPQ5JXC2 388 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 LRRC8BQ6P9F7 803 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 PACS1Q6VY07 963 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 HDAC10Q969S8 669 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 KCTD14Q9BQ13 255 aaPredicted RBP12.16□□□□□ -0.46
NEK1-201ENST00000439128 RAD21L1Q9H4I0 556 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 ATAD3AQ9NVI7 634 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 THRAP10827 490 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 ATP6V1B2P21281 511 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 ITPKBP27987 946 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 VAC14Q08AM6 782 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 TRIM69Q86WT6 500 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 CYP4Z2PQ8N1L4 340 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 EBF3Q9H4W6 596 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 ARHGAP28Q9P2N2 729 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 CIDEBQ9UHD4 219 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 INVSQ9Y283 1065 aa12.16□□□□□ -0.46
NEK1-201ENST00000439128 ARIH1Q9Y4X5 557 aaPredicted RBP12.16□□□□□ -0.46
NEK1-201ENST00000439128 CCDC154A6NI56 674 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 KCNU1A8MYU2 1149 aa12.15□□□□□ -0.46
NEK1-201ENST00000439128 SNAI1O95863 264 aaPredicted RBP12.15□□□□□ -0.46
NEK1-201ENST00000439128 ADRA1DP25100 572 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms