RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 SERPINA4P29622 427 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 MIPP30301 263 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 PRKCIP41743 596 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 ABCG1P45844 678 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 ZNF135P52742 658 aaPredicted RBP18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 EIF2B5Q13144 721 aaKnown RBP18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 LRRC14Q15048 493 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 UGP2Q16851 508 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 TMEM52BQ4KMG9 183 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 PRRT3Q5FWE3 981 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 TPRG1LQ5T0D9 272 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 BRAT1Q6PJG6 821 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 MACC1Q6ZN28 852 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 PHACTR4Q8IZ21 702 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 IFI44Q8TCB0 444 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 MAPK15Q8TD08 544 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 FNIP1Q8TF40 1166 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 GLMNQ92990 594 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 ZNF641Q96N77 438 aaPredicted RBP18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 NAP1L5Q96NT1 182 aaPredicted RBP18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 TUBGCP5Q96RT8 1024 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 PEBP4Q96S96 227 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 KCTD15Q96SI1 283 aaPredicted RBP18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 EDEM3Q9BZQ6 932 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 ATP13A3Q9H7F0 1226 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 KLF15Q9UIH9 416 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 LAMA5O15230 3695 aa18.63■□□□□ 0.57
AC004540.1-201ENST00000439120 CPED1A4D0V7 1026 aa18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 ERCC2P18074 760 aa18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 EIF4A3P38919 411 aaKnown RBP18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 RPIAP49247 311 aa18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 IRF4Q15306 451 aa18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 CDKN3Q16667 212 aa18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 TDRD12Q587J7 1177 aaKnown RBP18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 PSTKQ8IV42 348 aaKnown RBP18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 RBFAQ8N0V3 343 aa18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 TP53I13Q8NBR0 393 aaPredicted RBP18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 TRIM7Q9C029 511 aa18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 ZWILCHQ9H900 591 aa18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 PCDH12Q9NPG4 1184 aa18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 MBNL1Q9NR56 388 aaKnown RBP18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 SALL4Q9UJQ4 1053 aa18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 DOLKQ9UPQ8 538 aa18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 COQ6Q9Y2Z9 468 aa18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 KNTC1P50748 2209 aa18.62■□□□□ 0.57
AC004540.1-201ENST00000439120 NBEAQ8NFP9 2946 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 TSPAN11A1L157 253 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 DDX3XO00571 662 aaKnown RBP eCLIP18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 TPP1O14773 563 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 LZTS3O60299 673 aaPredicted RBP18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 BRINP1O60477 761 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 ANXA6P08133 673 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 SKILP12757 684 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 C6P13671 934 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 HTR1BP28222 390 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 ACTN2P35609 894 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 BLKP51451 505 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 PPARDQ03181 441 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 BCL2L1Q07817 233 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 NR0B2Q15466 257 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 E4F1Q66K89 784 aaPredicted RBP18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 SRLQ86TD4 932 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 CAMK1DQ8IU85 385 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 ARFGAP1Q8N6T3 406 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 TSEN2Q8NCE0 465 aaKnown RBP18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 ATP8A1Q9Y2Q0 1164 aa18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 URB1O60287 2271 aaKnown RBP18.61■□□□□ 0.57
AC004540.1-201ENST00000439120 LY6G6EA0A0G2JKS1 128 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 TMEM110-MUSTN1A8MSY1 372 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 H3BRJ5 948 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 CSO75390 466 aaKnown RBP18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 LRCH4O75427 683 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 CTSEP14091 401 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 ARL4AP40617 200 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 CSNK1DP48730 415 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 LIG3P49916 1009 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 ADKP55263 362 aaKnown RBP18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 IL10RBQ08334 325 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 C1orf61Q13536 156 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 RFTN1Q14699 578 aaPredicted RBP18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 EFL1Q7Z2Z2 1120 aaKnown RBP18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 LZTR1Q8N653 840 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 ATL2Q8NHH9 583 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 FGF11Q92914 225 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 TBATAQ96M53 351 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 LRRC61Q9BV99 259 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 TCEAL2Q9H3H9 227 aaPredicted RBP18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 PCDHB1Q9Y5F3 818 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 U3KQA8 63 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 CELSR3Q9NYQ7 3312 aa18.6■□□□□ 0.57
AC004540.1-201ENST00000439120 ITPR1Q14643 2758 aa18.59■□□□□ 0.57
AC004540.1-201ENST00000439120 ZFYVE26Q68DK2 2539 aa18.59■□□□□ 0.57
AC004540.1-201ENST00000439120 ANKRD36A6QL64 1941 aa18.59■□□□□ 0.57
AC004540.1-201ENST00000439120 TLX3O43711 291 aaPredicted RBP18.59■□□□□ 0.57
AC004540.1-201ENST00000439120 BUB1BO60566 1050 aaPredicted RBP18.59■□□□□ 0.57
AC004540.1-201ENST00000439120 PCCBP05166 539 aa18.59■□□□□ 0.57
AC004540.1-201ENST00000439120 MMP12P39900 470 aa18.59■□□□□ 0.57
AC004540.1-201ENST00000439120 EIF2S3P41091 472 aaKnown RBP18.59■□□□□ 0.57
AC004540.1-201ENST00000439120 HCAR3P49019 387 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms