RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TMEM132BQ14DG7 1078 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 SF3B4Q15427 424 aaKnown RBP eCLIP13.49□□□□□ -0.251e-25■■■■■ 49.5
ACTN1-204ENST00000438964 RABL3Q5HYI8 236 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 ZPBP2Q6X784 338 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 LDB1Q86U70 411 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-204ENST00000438964 SAPCD2Q86UD0 394 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 DDIASQ8IXT1 998 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 CADM3Q8N126 398 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 RYBPQ8N488 228 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-204ENST00000438964 RDM1Q8NG50 284 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 OR2T34Q8NGX1 318 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 OR2T3Q8NH03 318 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 NUDT8Q8WV74 236 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 GLT1D1Q96MS3 346 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 NT5C1AQ9BXI3 368 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 R3HDMLQ9H3Y0 253 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 IFT80Q9P2H3 777 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-204ENST00000438964 VPS28Q9UK41 221 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 SCN1AP35498 2009 aa13.49□□□□□ -0.25
ACTN1-204ENST00000438964 LRRC14BA6NHZ5 514 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 NRP2O60462 931 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 SULT1C4O75897 302 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 SNRPB2P08579 225 aaKnown RBP13.48□□□□□ -0.25
ACTN1-204ENST00000438964 NFKB1P19838 968 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 EEF1DP29692 281 aaKnown RBP13.48□□□□□ -0.25
ACTN1-204ENST00000438964 SPCS2Q15005 226 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 DPYSL2Q16555 572 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 ZNF789Q5FWF6 425 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 NOMO2Q5JPE7 1267 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 ERMP1Q7Z2K6 904 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 ALDH16A1Q8IZ83 802 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 ZC3H15Q8WU90 426 aaKnown RBP13.48□□□□□ -0.25
ACTN1-204ENST00000438964 HEXDCQ8WVB3 486 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 MUS81Q96NY9 551 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 MARCH7Q9H992 704 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 PRDM8Q9NQV8 689 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 AASSQ9UDR5 926 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 GPC6Q9Y625 555 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-204ENST00000438964 SPATA31C2B4DYI2 1134 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 MDM4O15151 490 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 MT-CYBP00156 380 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-204ENST00000438964 JAK1P23458 1154 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 SULT1E1P49888 294 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 AP3M2P53677 418 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 IST1P53990 364 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 HSDL1Q3SXM5 330 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 SPANXN3Q5MJ09 141 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 ZC3HC1Q86WB0 502 aaKnown RBP13.48□□□□□ -0.25
ACTN1-204ENST00000438964 EXOC8Q8IYI6 725 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 SNX19Q92543 992 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 TMEM74Q96NL1 305 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 LHPPQ9H008 270 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 IPO11Q9UI26 975 aaKnown RBP13.48□□□□□ -0.25
ACTN1-204ENST00000438964 CNOT11Q9UKZ1 510 aaKnown RBP13.48□□□□□ -0.25
ACTN1-204ENST00000438964 H3BMM5 538 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 PLA2G6O60733 806 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 CAPNS1P04632 268 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 MPOP05164 745 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 NDUFV1P49821 464 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 ZBTB17Q13105 803 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 RBM20Q5T481 1227 aaKnown RBP13.48□□□□□ -0.25
ACTN1-204ENST00000438964 DEFB106AQ8N104 65 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 RNF139Q8WU17 664 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 VPS33AQ96AX1 596 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 IL12RB2Q99665 862 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 MLPHQ9BV36 600 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-204ENST00000438964 CCDC90BQ9GZT6 254 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 TMEM134Q9H6X4 195 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 KLQ9UEF7 1012 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 ERGIC3Q9Y282 383 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 ACOT9Q9Y305 439 aa13.48□□□□□ -0.25
ACTN1-204ENST00000438964 PTGES3LE9PB15 166 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 PARNO95453 639 aaKnown RBP13.47□□□□□ -0.25
ACTN1-204ENST00000438964 ZNF12P17014 697 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 TAS2R39P59534 338 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 IFITM3Q01628 133 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 STX5Q13190 355 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 FAM83EQ2M2I3 478 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 LCLAT1Q6UWP7 414 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 UBR3Q6ZT12 1888 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 ITIH5Q86UX2 942 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 CAMK1DQ8IU85 385 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 SH3RF2Q8TEC5 729 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 CHPT1Q8WUD6 406 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 KCNA7Q96RP8 456 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 MRIQ9BWK5 157 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 HUS1O60921 280 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
ACTN1-204ENST00000438964 ESRRBO95718 433 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 FSHRP23945 695 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 LMO2P25791 158 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 PTPN3P26045 913 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 DCKP27707 260 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 SHMT2P34897 504 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 TPTEP56180 551 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 ENPEPQ07075 957 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 POLD3Q15054 466 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-204ENST00000438964 KCNJ8Q15842 424 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 ESRP1Q6NXG1 681 aaKnown RBP13.47□□□□□ -0.25
ACTN1-204ENST00000438964 SCIMPQ6UWF3 145 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms