RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 MMP13P45452 471 aa24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 NOP2P46087 812 aaKnown RBP24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 HADHBP55084 474 aaKnown RBP24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 POLR2LP62875 67 aaKnown RBP24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 FGL2Q14314 439 aa24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 RALGPS1Q5JS13 557 aa24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 TIGD7Q6NT04 549 aaPredicted RBP24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 KYAT3Q6YP21 454 aaKnown RBP24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 GCNT7Q6ZNI0 430 aa24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 SPATS2Q86XZ4 545 aaKnown RBP24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 DCP2Q8IU60 420 aaKnown RBP24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 RHOT1Q8IXI2 618 aa24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 RAPGEF5Q92565 580 aa24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 HAUS2Q9NVX0 235 aa24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 ANGPTL2Q9UKU9 493 aa24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 PCDHA13Q9Y5I0 950 aa24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 TP53BP1Q12888 1972 aaPredicted RBP24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 A0A1W2PQ67 120 aa24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 FPGTO14772 594 aa24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 SPOPO43791 374 aa24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 ITGAVP06756 1048 aa24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 EPHA8P29322 1005 aaPredicted RBP24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 CLDN2P57739 230 aa24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 IFI16Q16666 785 aaKnown RBP24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 TMEM52BQ4KMG9 183 aa24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 PTAR1Q7Z6K3 402 aaPredicted RBP24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 GLRX5Q86SX6 157 aa24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 OR13H1Q8NG92 308 aa24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 ECHDC3Q96DC8 303 aa24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 ZNF830Q96NB3 372 aaPredicted RBP24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 NUDCD1Q96RS6 583 aa24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 MGME1Q9BQP7 344 aa24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 PCDH12Q9NPG4 1184 aa24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 DDX56Q9NY93 547 aaKnown RBP24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 ATP8A1Q9Y2Q0 1164 aa24.95■■□□□ 1.58
RAPGEF1-206ENST00000438647 A0A0A6YYK5 440 aaPredicted RBP24.94■■□□□ 1.58
RAPGEF1-206ENST00000438647 MMP20O60882 483 aa24.94■■□□□ 1.58
RAPGEF1-206ENST00000438647 SOCS5O75159 536 aa24.94■■□□□ 1.58
RAPGEF1-206ENST00000438647 TRIM16O95361 564 aa24.94■■□□□ 1.58
RAPGEF1-206ENST00000438647 FECHP22830 423 aa24.94■■□□□ 1.58
RAPGEF1-206ENST00000438647 RABIFP47224 123 aa24.94■■□□□ 1.58
RAPGEF1-206ENST00000438647 FAM193AP78312 1265 aa24.94■■□□□ 1.58
RAPGEF1-206ENST00000438647 Q6ZSR6 202 aa24.94■■□□□ 1.58
RAPGEF1-206ENST00000438647 PQLC3Q8N755 202 aa24.94■■□□□ 1.58
RAPGEF1-206ENST00000438647 BAHD1Q8TBE0 780 aaPredicted RBP24.94■■□□□ 1.58
RAPGEF1-206ENST00000438647 SAP25Q8TEE9 199 aa24.94■■□□□ 1.58
RAPGEF1-206ENST00000438647 RNF157Q96PX1 679 aa24.94■■□□□ 1.58
RAPGEF1-206ENST00000438647 MAK16Q9BXY0 300 aaKnown RBP24.94■■□□□ 1.58
RAPGEF1-206ENST00000438647 SCUBE2Q9NQ36 999 aa24.94■■□□□ 1.58
RAPGEF1-206ENST00000438647 EPN1Q9Y6I3 576 aaPredicted RBP24.94■■□□□ 1.58
RAPGEF1-206ENST00000438647 RIOK3O14730 519 aaKnown RBP24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 NDUFA10O95299 355 aa24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 CR2P20023 1033 aa24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 COMTP21964 271 aa24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 NFKBIAP25963 317 aa24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 SHC2P98077 582 aa24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 FOXC1Q12948 553 aa24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 SHBQ15464 509 aa24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 TEX26Q8N6G2 289 aa24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 FATE1Q969F0 183 aa24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 BMFQ96LC9 184 aa24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 TSGA13Q96PP4 275 aa24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 KLF6Q99612 283 aaPredicted RBP24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 WRAP53Q9BUR4 548 aaKnown RBP24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 APOBEC2Q9Y235 224 aaKnown RBP24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 BTBD3Q9Y2F9 522 aa24.93■■□□□ 1.58
RAPGEF1-206ENST00000438647 TRAFD1O14545 582 aaPredicted RBP24.92■■□□□ 1.58
RAPGEF1-206ENST00000438647 RAD51BO15315 384 aa24.92■■□□□ 1.58
RAPGEF1-206ENST00000438647 KRT1P04264 644 aa24.92■■□□□ 1.58
RAPGEF1-206ENST00000438647 ITIH2P19823 946 aa24.92■■□□□ 1.58
RAPGEF1-206ENST00000438647 CCNCP24863 283 aa24.92■■□□□ 1.58
RAPGEF1-206ENST00000438647 MMP12P39900 470 aa24.92■■□□□ 1.58
RAPGEF1-206ENST00000438647 GATAD2AQ86YP4 633 aa24.92■■□□□ 1.58
RAPGEF1-206ENST00000438647 SPOCK2Q92563 424 aa24.92■■□□□ 1.58
RAPGEF1-206ENST00000438647 IFT43Q96FT9 208 aa24.92■■□□□ 1.58
RAPGEF1-206ENST00000438647 CALR3Q96L12 384 aaKnown RBP24.92■■□□□ 1.58
RAPGEF1-206ENST00000438647 AMACRQ9UHK6 382 aa24.92■■□□□ 1.58
RAPGEF1-206ENST00000438647 CFAP69A5D8W1 941 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 POM121BA6NF01 834 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 SOWAHDA6NJG2 315 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 MATN3O15232 486 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 PSTPIP1O43586 416 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 NEBLO76041 1014 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 ZFXP17010 805 aaPredicted RBP24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 CDC25BP30305 580 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 GBE1Q04446 702 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 ZSWIM9Q86XI8 627 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 PGBD5Q8N414 524 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 MAML1Q92585 1016 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 CENPTQ96BT3 561 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 HDAC11Q96DB2 347 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 POLR1EQ9GZS1 481 aaKnown RBP24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 NOD2Q9HC29 1040 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 NT5MQ9NPB1 228 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 GPR27Q9NS67 375 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 DTLQ9NZJ0 730 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 IMPACTQ9P2X3 320 aa24.91■■□□□ 1.58
RAPGEF1-206ENST00000438647 TOR1BO14657 336 aa24.9■■□□□ 1.58
RAPGEF1-206ENST00000438647 APOL1O14791 398 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms