RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 NFKB1P19838 968 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 XPAP23025 273 aaPredicted RBP16.29■□□□□ 0.2
SNRPB-202ENST00000438552 MAOBP27338 520 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 MAT2AP31153 395 aaKnown RBP16.29■□□□□ 0.2
SNRPB-202ENST00000438552 MPLP40238 635 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 CD86P42081 329 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 CCDC15Q0P6D6 951 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 TEX44Q53QW1 395 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 BRAT1Q6PJG6 821 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 TTC7BQ86TV6 843 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 RGL4Q8IZJ4 473 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 ZNF567Q8N184 647 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 SLC35B2Q8TB61 432 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 PIGKQ92643 395 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 TEKT5Q96M29 485 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 RBM15Q96T37 977 aaKnown RBP eCLIP16.29■□□□□ 0.2
SNRPB-202ENST00000438552 HINFPQ9BQA5 517 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 KDM4CQ9H3R0 1056 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 SMOC1Q9H4F8 434 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 GLOD4Q9HC38 313 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 PCDH12Q9NPG4 1184 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 KCND1Q9NSA2 647 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 DNPEPQ9ULA0 475 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 RAI2Q9Y5P3 530 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 SLCO1B1Q9Y6L6 691 aa16.29■□□□□ 0.2
SNRPB-202ENST00000438552 TRPM6Q9BX84 2022 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 A0A1W2PQU0 124 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 BCLAF3A2AJT9 711 aaKnown RBP16.28■□□□□ 0.2
SNRPB-202ENST00000438552 C10orf142B7Z368 130 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 NEMP1O14524 444 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 AREL1O15033 823 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 AP1G1O43747 822 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 LIASO43766 372 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 PCDH8O95206 1070 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 RETP07949 1114 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 SERPINF2P08697 491 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 CD68P34810 354 aaPredicted RBP16.28■□□□□ 0.2
SNRPB-202ENST00000438552 SKOR1P84550 965 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 SEMG2Q02383 582 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 SIX1Q15475 284 aaPredicted RBP16.28■□□□□ 0.2
SNRPB-202ENST00000438552 UGP2Q16851 508 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 SYCP2LQ5T4T6 812 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 SEL1L3Q68CR1 1132 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 TRIM69Q86WT6 500 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 SPATA22Q8NHS9 363 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 HCAR2Q8TDS4 363 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 C1orf54Q8WWF1 131 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 KLK6Q92876 244 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 RAB7BQ96AH8 199 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 IMP4Q96G21 291 aaKnown RBP16.28■□□□□ 0.2
SNRPB-202ENST00000438552 MS4A14Q96JA4 679 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 OSBPL9Q96SU4 736 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 TDRD1Q9BXT4 1180 aaKnown RBP16.28■□□□□ 0.2
SNRPB-202ENST00000438552 MIR1-1HGQ9H1L0 117 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 TMEM74BQ9NUR3 256 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 EIF2B4Q9UI10 523 aaKnown RBP16.28■□□□□ 0.2
SNRPB-202ENST00000438552 SNX12Q9UMY4 172 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 ZFR2Q9UPR6 939 aaKnown RBP16.28■□□□□ 0.2
SNRPB-202ENST00000438552 PCDHB9Q9Y5E1 797 aa16.28■□□□□ 0.2
SNRPB-202ENST00000438552 ZFHX2Q9C0A1 2572 aaPredicted RBP16.28■□□□□ 0.2
SNRPB-202ENST00000438552 ADAMTS9Q9P2N4 1935 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 GFRA3O60609 400 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 PGLSO95336 258 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 PDHA1P08559 390 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 CES1P23141 567 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 MMP12P39900 470 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 CCR5P51681 352 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 SNX1Q13596 522 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 LONRF2Q1L5Z9 754 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 WDR45BQ5MNZ6 344 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 ARMC12Q5T9G4 340 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 PRPF39Q86UA1 669 aaKnown RBP16.27■□□□□ 0.2
SNRPB-202ENST00000438552 ZCCHC9Q8N567 271 aaKnown RBP16.27■□□□□ 0.2
SNRPB-202ENST00000438552 DCLK2Q8N568 766 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 COG1Q8WTW3 980 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 RUBCNQ92622 972 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 PBKQ96KB5 322 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 VAT1Q99536 393 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 TMEM121Q9BTD3 319 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 WRAP53Q9BUR4 548 aaKnown RBP16.27■□□□□ 0.2
SNRPB-202ENST00000438552 SLC25A51Q9H1U9 297 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 EBF2Q9HAK2 575 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 USP29Q9HBJ7 922 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 SMARCAL1Q9NZC9 954 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 RSPH14Q9UHP6 348 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 PILRBQ9UKJ0 227 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 CHKBQ9Y259 395 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 PCDHGA5Q9Y5G8 931 aa16.27■□□□□ 0.2
SNRPB-202ENST00000438552 GON4LQ3T8J9 2241 aa16.26■□□□□ 0.19
SNRPB-202ENST00000438552 LAMA1P25391 3075 aa16.26■□□□□ 0.19
SNRPB-202ENST00000438552 FANCGO15287 622 aa16.26■□□□□ 0.19
SNRPB-202ENST00000438552 LATO43561 262 aa16.26■□□□□ 0.19
SNRPB-202ENST00000438552 STK10O94804 968 aaKnown RBP16.26■□□□□ 0.19
SNRPB-202ENST00000438552 MT-CYBP00156 380 aaPredicted RBP16.26■□□□□ 0.19
SNRPB-202ENST00000438552 PRLRP16471 622 aa16.26■□□□□ 0.19
SNRPB-202ENST00000438552 GDF10P55107 478 aa16.26■□□□□ 0.19
SNRPB-202ENST00000438552 SPEM2Q0P670 501 aa16.26■□□□□ 0.19
SNRPB-202ENST00000438552 ELP6Q0PNE2 266 aa16.26■□□□□ 0.19
SNRPB-202ENST00000438552 OASLQ15646 514 aaKnown RBP16.26■□□□□ 0.19
SNRPB-202ENST00000438552 PCSK7Q16549 785 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms