RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 SLC9B1Q4ZJI4 515 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 FSCBQ5H9T9 825 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 C9orf47Q6ZRZ4 202 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 Q6ZSV7 163 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 MON1BQ7L1V2 547 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 ZNF367Q7RTV3 350 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 KIAA2013Q8IYS2 634 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 ASB5Q8WWX0 329 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 ZC3HAV1LQ96H79 300 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 KLHL15Q96M94 604 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 C7orf26Q96N11 449 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 BARD1Q99728 777 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 LBHD1Q9BQE6 289 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 MSTO1Q9BUK6 570 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 DCLK3Q9C098 648 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 PDCL3Q9H2J4 239 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 EBF3Q9H4W6 596 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 MRPL44Q9H9J2 332 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 TAS2R10Q9NYW0 307 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 SWAP70Q9UH65 585 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 A0A087X0M5 115 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 A0A0U1RQF3 1178 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 A0A1B0GX30 115 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 A0A1W2PQM1 296 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 OR6C75A6NL08 312 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 HSPB2A8KAH6 182 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 BECN2A8MW95 431 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 ASAP2O43150 1006 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 RGS14O43566 566 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 MTA2O94776 668 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 TMEM63AO94886 807 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 EPHA8P29322 1005 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 HOXD3P31249 432 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 THPOP40225 353 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 HARS2P49590 506 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 CLCN5P51795 746 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 EIF5P55010 431 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 EIF3BP55884 814 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 CLDN2P57739 230 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 ADORA2A-AS1P86434 159 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 NEXNQ0ZGT2 675 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 TRAF1Q13077 416 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 GPS2Q13227 327 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 FHL1Q13642 323 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 HSPB2Q16082 182 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 FNBP1LQ5T0N5 605 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 TXNDC8Q6A555 127 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 CES5AQ6NT32 575 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 ZNF549Q6P9A3 640 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 ATF7IPQ6VMQ6 1270 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 SFTPA2Q8IWL1 248 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 ANKRD52Q8NB46 1076 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 GJC3Q8NFK1 279 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 NR1H4Q96RI1 486 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 H2AFJQ9BTM1 129 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 HEMGNQ9BXL5 484 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 USP44Q9H0E7 712 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 KRT84Q9NSB2 600 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 FBXO2Q9UK22 296 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 NAALADL1Q9UQQ1 740 aa3.82□□□□□ -1.8
TRAPPC13-204ENST00000438419 KDM3AQ9Y4C1 1321 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 DYTNA2CJ06 578 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 PGPEP1LA6NFU8 196 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 KDM4EB2RXH2 506 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 KLRF2D3W0D1 207 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 TAF4O00268 1085 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 LDLRAD4O15165 306 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 INSIG1O15503 277 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 ITM2AO43736 263 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 EIF5BO60841 1220 aaKnown RBP3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 RNASEH2AO75792 299 aaKnown RBP3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 SOX30O94993 753 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 ALPLP05186 524 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 LDHCP07864 332 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 CBSLP0DN79 551 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 NAGAP17050 411 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 ARRB2P32121 409 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 CBSP35520 551 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 CPOXP36551 454 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 RFX5P48382 616 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 CTCFP49711 727 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 EFNA5P52803 228 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 HDAC4P56524 1084 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 DCAF7P61962 342 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 ARHGEF6Q15052 776 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 RNPS1Q15287 305 aaKnown RBP3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 ESCO2Q56NI9 601 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 SLC45A4Q5BKX6 768 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 ITPRIPL1Q6GPH6 555 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 CPLX2Q6PUV4 134 aaKnown RBP3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 SLC46A3Q7Z3Q1 461 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 CPLX4Q7Z7G2 160 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 MB21D2Q8IYB1 491 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 SAMD14Q8IZD0 417 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 CNTROBQ8N137 903 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 SNAPC3Q92966 411 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 BBS4Q96RK4 519 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 SIN3AQ96ST3 1273 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 CHCHD6Q9BRQ6 235 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 NUF2Q9BZD4 464 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms