RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 TRIM7Q9C029 511 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 CWC15Q9P013 229 aaKnown RBP17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 IP6K2Q9UHH9 426 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 FREM2Q5SZK8 3169 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 CFAP47Q6ZTR5 3102 aa17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 INSIG1O15503 277 aa17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 PIGNO95427 931 aa17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 GP1BAP07359 652 aa17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 JUNDP17535 347 aa17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 PBX1P40424 430 aa17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 TARDBPQ13148 414 aaKnown RBP eCLIP17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 DPYSQ14117 519 aa17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 DPYSL2Q16555 572 aa17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 LRRC73Q5JTD7 316 aa17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 ZCCHC8Q6NZY4 707 aaKnown RBP17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 CYP4V2Q6ZWL3 525 aaPredicted RBP17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 MARCH9Q86YJ5 346 aa17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 ZNF548Q8NEK5 533 aaPredicted RBP17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 TBATAQ96M53 351 aa17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 WRAP53Q9BUR4 548 aaKnown RBP17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 SLC13A1Q9BZW2 595 aa17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 NRSN2Q9GZP1 204 aa17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 SPASTQ9UBP0 616 aa17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 SEPT3Q9UH03 358 aa17.71■□□□□ 0.43
SBDSP1-203ENST00000437201 CFAP69A5D8W1 941 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 K7ESM1 405 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 TPP1O14773 563 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 AQP9O43315 295 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 PEX5P50542 639 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 BLKP51451 505 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 BCL2L1Q07817 233 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 LRRC14Q15048 493 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 NFKBIBQ15653 356 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 TMCO3Q6UWJ1 677 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 CAMK1DQ8IU85 385 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 ARHGAP12Q8IWW6 846 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 BBS5Q8N3I7 341 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 NIPA2Q8N8Q9 360 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 TSEN2Q8NCE0 465 aaKnown RBP17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 CPLX3Q8WVH0 158 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 TEKT4Q8WW24 435 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 GLMNQ92990 594 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 APOLD1Q96LR9 279 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 IL12RB2Q99665 862 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 PCDH12Q9NPG4 1184 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 CLCA2Q9UQC9 943 aa17.7■□□□□ 0.42
SBDSP1-203ENST00000437201 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.7■□□□□ 0.425e-7■■■■□ 25.2
SBDSP1-203ENST00000437201 CHD6Q8TD26 2715 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 WDFY3Q8IZQ1 3526 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 MYO1FO00160 1098 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 BUB1BO60566 1050 aaPredicted RBP17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 GIMD1P0DJR0 217 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 NFKBIAP25963 317 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 HTR1BP28222 390 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 SERPINB6P35237 376 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 HSPA9P38646 679 aaKnown RBP17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 EIF4A3P38919 411 aaKnown RBP17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 AP1S1P61966 158 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 AGERQ15109 404 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 SKOR2Q2VWA4 1001 aaPredicted RBP17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 MACC1Q6ZN28 852 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 POLNQ7Z5Q5 900 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 NPWQ8N729 165 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 TP53I13Q8NBR0 393 aaPredicted RBP17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 ATL2Q8NHH9 583 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 NSMCE1Q8WV22 266 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 HSPH1Q92598 858 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 PSKH2Q96QS6 385 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 NUP85Q9BW27 656 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 THAP2Q9H0W7 228 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 ABCG4Q9H172 646 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 APOBEC3BQ9UH17 382 aaKnown RBP17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 SALL4Q9UJQ4 1053 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 ANAPC7Q9UJX3 599 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 ATP8A1Q9Y2Q0 1164 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 AK5Q9Y6K8 562 aa17.69■□□□□ 0.42
SBDSP1-203ENST00000437201 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 A0A1W2PQ67 120 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 LZTS3O60299 673 aaPredicted RBP17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 CYP1A2P05177 515 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 ITIH2P19823 946 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 IGFALSP35858 605 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 RPIAP49247 311 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 LIG3P49916 1009 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 SCNN1BP51168 640 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 INSM1Q01101 510 aaPredicted RBP17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 PPARDQ03181 441 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 EIF2B5Q13144 721 aaKnown RBP17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 LBRQ14739 615 aaKnown RBP17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 HADHQ16836 314 aaKnown RBP17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 SMTNL2Q2TAL5 461 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 FAXCQ5TGI0 409 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 ALKBH5Q6P6C2 394 aaKnown RBP17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 DCBLD1Q8N8Z6 715 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 LMX1AQ8TE12 382 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 SCG3Q8WXD2 468 aaKnown RBP17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 SCUBE2Q9NQ36 999 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 IFNKQ9P0W0 207 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 LCMT1Q9UIC8 334 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms