RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 METTL18O95568 372 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 MT-CYBP00156 380 aaPredicted RBP13.59□□□□□ -0.23
EXT1-203ENST00000437196 CPP00450 1065 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 MMP2P08253 660 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 ZSCAN5DPP0CG00 497 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 ETS1P14921 441 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 OXTRP30559 389 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 GKP32189 559 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 PTGIRP43119 386 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 ELP6Q0PNE2 266 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 SEMA5AQ13591 1074 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 ERAP2Q6P179 960 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 ERN2Q76MJ5 926 aaKnown RBP13.59□□□□□ -0.23
EXT1-203ENST00000437196 BBOF1Q8ND07 529 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 MDGA1Q8NFP4 955 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 SPATA22Q8NHS9 363 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 CARD6Q9BX69 1037 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 ETNK1Q9HBU6 452 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 ITM2CQ9NQX7 267 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 EIF2B3Q9NR50 452 aaKnown RBP13.59□□□□□ -0.23
EXT1-203ENST00000437196 FBXL12Q9NXK8 326 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 SARDHQ9UL12 918 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 NEU2Q9Y3R4 380 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 PCDHB9Q9Y5E1 797 aa13.59□□□□□ -0.23
EXT1-203ENST00000437196 TTC24A2A3L6 582 aaPredicted RBP13.58□□□□□ -0.24
EXT1-203ENST00000437196 C16orf96A6NNT2 1141 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 K7ESF4 209 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 AXIN1O15169 862 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 TTI1O43156 1089 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 RNASEH2AO75792 299 aaKnown RBP13.58□□□□□ -0.24
EXT1-203ENST00000437196 PGLSO95336 258 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 AP2A1O95782 977 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 NDST3O95803 873 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 APRTP07741 180 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 HLA-DPA1P20036 260 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 GRIA4P48058 902 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 VPS41P49754 854 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 WNT3AP56704 352 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 TRAF2Q12933 501 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 TRIP13Q15645 432 aaPredicted RBP13.58□□□□□ -0.24
EXT1-203ENST00000437196 PCSK7Q16549 785 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 UGP2Q16851 508 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 ZNF528Q3MIS6 628 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 USP39Q53GS9 565 aaKnown RBP13.58□□□□□ -0.24
EXT1-203ENST00000437196 USP45Q70EL2 814 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 TTC7BQ86TV6 843 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 KLHDC8BQ8IXV7 354 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 HDDC3Q8N4P3 179 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 GLIS1Q8NBF1 620 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 IPMKQ8NFU5 416 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 RMDN1Q96DB5 314 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 ERLEC1Q96DZ1 483 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 OXNAD1Q96HP4 312 aaPredicted RBP13.58□□□□□ -0.24
EXT1-203ENST00000437196 SPACA7Q96KW9 195 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 PRRX2Q99811 253 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 KDM4CQ9H3R0 1056 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 UBP1Q9NZI7 540 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 USP36Q9P275 1121 aaKnown RBP13.58□□□□□ -0.24
EXT1-203ENST00000437196 CHKBQ9Y259 395 aa13.58□□□□□ -0.24
EXT1-203ENST00000437196 LOC285095A0A1B0GVY8 99 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 A0A1W2PP55 124 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 FAM86C2PA6NEL3 165 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 EFCAB8A8MWE9 144 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 UPK3BL1B0FP48 263 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 ANKRD66B4E2M5 251 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 UPK3BL2E5RIL1 263 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 RAD51CO43502 376 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 FZD6O60353 706 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 GJB3O75712 270 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 IGLV3-19P01714 112 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 FGF1P05230 155 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 ADRB3P13945 408 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 TPSB2P20231 275 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 TPSAB1Q15661 275 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 KDELC1Q6UW63 502 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 C11orf74Q86VG3 221 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 CACUL1Q86Y37 369 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 PDCD7Q8N8D1 485 aaKnown RBP13.57□□□□□ -0.24
EXT1-203ENST00000437196 MRGPRX2Q96LB1 330 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 TBL1YQ9BQ87 522 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 ERP44Q9BS26 406 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 BTBD1Q9H0C5 482 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 SGK2Q9HBY8 427 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 POLR3BQ9NW08 1133 aaPredicted RBP13.57□□□□□ -0.24
EXT1-203ENST00000437196 C2orf42Q9NWW7 574 aa13.57□□□□□ -0.24
EXT1-203ENST00000437196 TPX2Q9ULW0 747 aaKnown RBP13.57□□□□□ -0.24
EXT1-203ENST00000437196 F5H423 210 aaPredicted RBP13.56□□□□□ -0.24
EXT1-203ENST00000437196 NEMP1O14524 444 aa13.56□□□□□ -0.24
EXT1-203ENST00000437196 AP1G1O43747 822 aa13.56□□□□□ -0.24
EXT1-203ENST00000437196 SUN1O94901 812 aa13.56□□□□□ -0.24
EXT1-203ENST00000437196 CYP2A6P11509 494 aaPredicted RBP13.56□□□□□ -0.24
EXT1-203ENST00000437196 DRD3P35462 400 aa13.56□□□□□ -0.24
EXT1-203ENST00000437196 P2RY2P41231 377 aa13.56□□□□□ -0.24
EXT1-203ENST00000437196 MAGEA6P43360 314 aa13.56□□□□□ -0.24
EXT1-203ENST00000437196 TPMTP51580 245 aa13.56□□□□□ -0.24
EXT1-203ENST00000437196 CSTF1Q05048 431 aaKnown RBP13.56□□□□□ -0.24
EXT1-203ENST00000437196 CNTN1Q12860 1018 aa13.56□□□□□ -0.24
EXT1-203ENST00000437196 CALCOCO2Q13137 446 aa13.56□□□□□ -0.24
EXT1-203ENST00000437196 POM121L1PQ3SYA9 428 aa13.56□□□□□ -0.24
EXT1-203ENST00000437196 FAXCQ5TGI0 409 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms