RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 SLCO1B3Q9NPD5 702 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 GGT7Q9UJ14 662 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 PLLPQ9Y342 182 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 PDHA1P08559 390 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 HNRNPA1P09651 372 aaKnown RBP eCLIP21.29■■□□□ 1
PTPRF-207ENST00000436724 PFKLP17858 780 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 SPRP35270 261 aaPredicted RBP21.29■■□□□ 1
PTPRF-207ENST00000436724 PGGT1BP53609 377 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 MPP1Q00013 466 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 LMAN2Q12907 356 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 PTPRCAPQ14761 206 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 ARHGAP15Q53QZ3 475 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 PRSS36Q5K4E3 855 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 TSTD2Q5T7W7 516 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 RTL10Q7L3V2 364 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 TMEM25Q86YD3 366 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 PRKD2Q9BZL6 878 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 HAUS2Q9NVX0 235 aa21.29■■□□□ 1
PTPRF-207ENST00000436724 LDB2O43679 373 aa21.28■■□□□ 1
PTPRF-207ENST00000436724 DNAJC8O75937 253 aaPredicted RBP21.28■■□□□ 1
PTPRF-207ENST00000436724 AHSGP02765 367 aa21.28■■□□□ 1
PTPRF-207ENST00000436724 DHRS4L1P0CG22 281 aa21.28■■□□□ 1
PTPRF-207ENST00000436724 DLG2Q15700 870 aa21.28■■□□□ 1
PTPRF-207ENST00000436724 FYB2Q5VWT5 728 aa21.28■■□□□ 1
PTPRF-207ENST00000436724 DCAF4L2Q8NA75 395 aa21.28■■□□□ 1
PTPRF-207ENST00000436724 RANBP9Q96S59 729 aa21.28■■□□□ 1
PTPRF-207ENST00000436724 LINC00597Q9H2U6 94 aa21.28■■□□□ 1
PTPRF-207ENST00000436724 LHX3Q9UBR4 397 aa21.28■■□□□ 1
PTPRF-207ENST00000436724 ARL5AQ9Y689 179 aa21.28■■□□□ 1
PTPRF-207ENST00000436724 UNC80Q8N2C7 3258 aa21.28■■□□□ 1
PTPRF-207ENST00000436724 MROH6A6NGR9 719 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 FGF19O95750 216 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 EPOP01588 193 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 FGF1P05230 155 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 CEBPBP17676 345 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 HLA-DPA1P20036 260 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 TYK2P29597 1187 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 ARSDP51689 593 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 MPP7Q5T2T1 576 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 ATXN7L2Q5T6C5 722 aaPredicted RBP21.27■■□□□ 1
PTPRF-207ENST00000436724 KIAA0930Q6ICG6 404 aaPredicted RBP21.27■■□□□ 1
PTPRF-207ENST00000436724 ARMC2Q8NEN0 867 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 PTPRN2Q92932 1015 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 VPS39Q96JC1 886 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 SNX15Q9NRS6 342 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 INTS6Q9UL03 887 aaKnown RBP21.27■■□□□ 1
PTPRF-207ENST00000436724 ANKRD36A6QL64 1941 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 SMAD6O43541 496 aaKnown RBP21.27■■□□□ 1
PTPRF-207ENST00000436724 PRLP01236 227 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 PAMP19021 973 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 DDX6P26196 483 aaKnown RBP eCLIP21.27■■□□□ 14e-6■■■■□ 24.4
PTPRF-207ENST00000436724 SLC1A2P43004 574 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 ZNF470Q6ECI4 717 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 TRPM8Q7Z2W7 1104 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 LRRC8CQ8TDW0 803 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 ZNF75CPQ92670 426 aaPredicted RBP21.27■■□□□ 1
PTPRF-207ENST00000436724 NUDCD1Q96RS6 583 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 MECRQ9BV79 373 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 TDRD1Q9BXT4 1180 aaKnown RBP21.27■■□□□ 1
PTPRF-207ENST00000436724 TM6SF2Q9BZW4 377 aa21.27■■□□□ 1
PTPRF-207ENST00000436724 NDST3O95803 873 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 CRHR1P34998 444 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 RHOAP61586 193 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 IRX4P78413 519 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 TMPRSS15P98073 1019 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 THOC5Q13769 683 aaKnown RBP21.26■□□□□ 0.99
PTPRF-207ENST00000436724 GRM3Q14832 879 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 INO80DQ53TQ3 878 aaPredicted RBP21.26■□□□□ 0.99
PTPRF-207ENST00000436724 CGB2Q6NT52 195 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 C16orf46Q6P387 395 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 TMC5Q6UXY8 1006 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 ZC3HC1Q86WB0 502 aaKnown RBP21.26■□□□□ 0.99
PTPRF-207ENST00000436724 CNTN4Q8IWV2 1026 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 FIBINQ8TAL6 211 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 ITFG1Q8TB96 612 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 PDCD6IPQ8WUM4 868 aaKnown RBP21.26■□□□□ 0.99
PTPRF-207ENST00000436724 RMDN1Q96DB5 314 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 C2orf49Q9BVC5 232 aaPredicted RBP21.26■□□□□ 0.99
PTPRF-207ENST00000436724 PBX4Q9BYU1 374 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 MKS1Q9NXB0 559 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 SLC12A4Q9UP95 1085 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 ATG2AQ2TAZ0 1938 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 AURKAO14965 403 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 SAT1P21673 171 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 CSE1LP55060 971 aaKnown RBP21.26■□□□□ 0.99
PTPRF-207ENST00000436724 PTPRRQ15256 657 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 ARID3BQ8IVW6 561 aaPredicted RBP21.26■□□□□ 0.99
PTPRF-207ENST00000436724 OR6K2Q8NGY2 324 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 VPS11Q9H270 941 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 ABCB8Q9NUT2 735 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 ZDHHC7Q9NXF8 308 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.26■□□□□ 0.991e-7■■■□□ 18.6
PTPRF-207ENST00000436724 USP15Q9Y4E8 981 aaPredicted RBP21.26■□□□□ 0.99
PTPRF-207ENST00000436724 SPO11Q9Y5K1 396 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 RAI2Q9Y5P3 530 aa21.26■□□□□ 0.99
PTPRF-207ENST00000436724 MYO9BQ13459 2157 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 OR51F1A6NGY5 319 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 CYBBP04839 570 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 BMP1P13497 986 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 ALADP13716 330 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms