RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 CDKAL1Q5VV42 579 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 LVRNQ6Q4G3 990 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CRTC1Q6UUV9 634 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 LEKR1Q6ZMV7 388 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ZNF605Q86T29 641 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 TTC7BQ86TV6 843 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PHF13Q86YI8 300 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 FSTL5Q8N475 847 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 KYQ8NBH2 561 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PCDH19Q8TAB3 1148 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 HCAR2Q8TDS4 363 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CXorf40AQ8TE69 158 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 HMCESQ96FZ2 354 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 SLC13A1Q9BZW2 595 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 TAB2Q9NYJ8 693 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 RABGEF1Q9UJ41 708 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ACSL6Q9UKU0 697 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 SIK3Q9Y2K2 1263 aa11.07□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CCDC187A0A096LP49 1063 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 RASA4BC9J798 803 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 D6RAR5 112 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 INSIG1O15503 277 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 RASA4O43374 803 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ANXA6P08133 673 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 KRT3P12035 628 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 C6P13671 934 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ITIH2P19823 946 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 GPD1P21695 349 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 EPHB2P29323 1055 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 RBMS1P29558 406 aaKnown RBP11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 MMP12P39900 470 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 BLKP51451 505 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ADKP55263 362 aaKnown RBP11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 POLR2FP61218 127 aaKnown RBP11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PPARDQ03181 441 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 EIF3IQ13347 325 aaKnown RBP11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 SERINC3Q13530 473 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 SPIDRQ14159 915 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 NFATC4Q14934 902 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 KRT31Q15323 416 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CLEC16AQ2KHT3 1053 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 WSCD2Q2TBF2 565 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 TAF1BQ53T94 588 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PPP1R15BQ5SWA1 713 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 KCTD16Q68DU8 428 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 WDR59Q6PJI9 974 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 SLFN11Q7Z7L1 901 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 B3GNT8Q7Z7M8 397 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PHLDB2Q86SQ0 1253 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 UMODL1-AS1Q8N2C9 162 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PYROXD2Q8N2H3 581 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 SDR16C5Q8N3Y7 309 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ARL14Q8N4G2 192 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 NETO2Q8NC67 525 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 WDR36Q8NI36 951 aaKnown RBP11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ENOX1Q8TC92 643 aaKnown RBP11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CCDC97Q96F63 343 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 WRAP53Q9BUR4 548 aaKnown RBP11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 FAM207AQ9NSI2 230 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PADI4Q9UM07 663 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PCDHGA7Q9Y5G6 932 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 GTF3C3Q9Y5Q9 886 aa11.06□□□□□ -0.64
SPTLC1P4-201ENST00000435997 A0A1W2PQM1 296 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 SIGLEC16A6NMB1 481 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PES1O00541 588 aaKnown RBP11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PLD2O14939 933 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CCP110O43303 1012 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PIGNO95427 931 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CCKBRP32239 447 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 NSFP46459 744 aaKnown RBP11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ZNF143P52747 638 aaPredicted RBP11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 AIF1P55008 147 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 RHOAP61586 193 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 RAD51Q06609 339 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ELP6Q0PNE2 266 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 RALGDSQ12967 914 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 LRRC14Q15048 493 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ELOCQ15369 112 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CYTH1Q15438 398 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 UGP2Q16851 508 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 EFHC2Q5JST6 749 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ESRP1Q6NXG1 681 aaKnown RBP11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 NYAP1Q6ZVC0 841 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ZSWIM9Q86XI8 627 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 DNAAF5Q86Y56 855 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 GLMNQ92990 594 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CCDC74AQ96AQ1 378 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PDXPQ96GD0 296 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 RBM15Q96T37 977 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 EDEM3Q9BZQ6 932 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 NUP62CLQ9H1M0 184 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 LRRC19Q9H756 370 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 PCDH12Q9NPG4 1184 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ADAM22Q9P0K1 906 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 ATXN7L1Q9ULK2 861 aaPredicted RBP11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 FZD10Q9ULW2 581 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 DGKBQ9Y6T7 804 aa11.05□□□□□ -0.64
SPTLC1P4-201ENST00000435997 CFAP69A5D8W1 941 aa11.04□□□□□ -0.64
SPTLC1P4-201ENST00000435997 TMEM110-MUSTN1A8MSY1 372 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms