RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 FAM161BQ96MY7 647 aa23.94■■□□□ 1.42
MBD3-202ENST00000434436 MATN2O00339 956 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 SLC7A4O43246 635 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 LMNAP02545 664 aaKnown RBP23.93■■□□□ 1.42
MBD3-202ENST00000434436 CXCL10P02778 98 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 SLC12A2P55011 1212 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 MTA1Q13330 715 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 DNAL1Q4LDG9 190 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 LDB1Q86U70 411 aaPredicted RBP23.93■■□□□ 1.42
MBD3-202ENST00000434436 OR7D4Q8NG98 312 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 OR52B2Q96RD2 323 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 MRPL46Q9H2W6 279 aaKnown RBP23.93■■□□□ 1.42
MBD3-202ENST00000434436 MFSD1Q9H3U5 465 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 ZFP37Q9Y6Q3 630 aaPredicted RBP23.93■■□□□ 1.42
MBD3-202ENST00000434436 OR51F1A6NGY5 319 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 TM7SF2O76062 418 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 CLCN5P51795 746 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 ZNF235Q14590 738 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 SCUBE1Q8IWY4 988 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 PHTF2Q8N3S3 785 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 ZNF512Q96ME7 567 aaPredicted RBP23.93■■□□□ 1.42
MBD3-202ENST00000434436 THTPAQ9BU02 230 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 MARCH4Q9P2E8 410 aaPredicted RBP23.93■■□□□ 1.42
MBD3-202ENST00000434436 ZDHHC2Q9UIJ5 367 aa23.93■■□□□ 1.42
MBD3-202ENST00000434436 H3BNC9 293 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 ZBTB14O43829 449 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 UPP2O95045 317 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 SEC24AO95486 1093 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 RPL14P50914 215 aaKnown RBP23.92■■□□□ 1.42
MBD3-202ENST00000434436 MXRA7P84157 204 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 USP41Q3LFD5 358 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.92■■□□□ 1.424e-7■■■■□ 25.5
MBD3-202ENST00000434436 OR6P1Q8NGX9 317 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 CDK5RAP1Q96SZ6 601 aaKnown RBP23.92■■□□□ 1.42
MBD3-202ENST00000434436 MRPL57Q9BQC6 102 aaKnown RBP23.92■■□□□ 1.42
MBD3-202ENST00000434436 ZNF840PA6NDX5 716 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 E9PBE3 544 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 GRID2O43424 1007 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 KLHL41O60662 606 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 KRT36O76013 467 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 ALDH7A1P49419 539 aaKnown RBP23.92■■□□□ 1.42
MBD3-202ENST00000434436 GNA12Q03113 381 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 DEFB128Q7Z7B8 93 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 GALNT7Q86SF2 657 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 ULK2Q8IYT8 1036 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 RNF168Q8IYW5 571 aaPredicted RBP23.92■■□□□ 1.42
MBD3-202ENST00000434436 TXNDC5Q8NBS9 432 aaKnown RBP23.92■■□□□ 1.42
MBD3-202ENST00000434436 SGF29Q96ES7 293 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 FEM1CQ96JP0 617 aa23.92■■□□□ 1.42
MBD3-202ENST00000434436 COCHO43405 550 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 HMGA1P17096 107 aaKnown RBP23.91■■□□□ 1.42
MBD3-202ENST00000434436 TUFMP49411 452 aaKnown RBP23.91■■□□□ 1.42
MBD3-202ENST00000434436 RPS24P62847 133 aaKnown RBP23.91■■□□□ 1.42
MBD3-202ENST00000434436 CSHL1Q14406 222 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 IFT43Q96FT9 208 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 ZNF599Q96NL3 588 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 PPP1R12CQ9BZL4 782 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 SHCBP1LQ9BZQ2 653 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 MAGEH1Q9H213 219 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 CWH43Q9H720 699 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 BACE2Q9Y5Z0 518 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 DCXO43602 365 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 S1PR4O95977 384 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 RPSAP08865 295 aaKnown RBP23.91■■□□□ 1.42
MBD3-202ENST00000434436 TFEBP19484 476 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 GLDCP23378 1020 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 PRMT2P55345 433 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 SLC25A3Q00325 362 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 PRKAA1Q13131 559 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 PTPRCAPQ14761 206 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 HECTD2Q5U5R9 776 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 ALG1LQ6GMV1 187 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 FAM43BQ6ZT52 329 aaPredicted RBP23.91■■□□□ 1.42
MBD3-202ENST00000434436 DENND1CQ8IV53 801 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 PRICKLE1Q96MT3 831 aaPredicted RBP23.91■■□□□ 1.42
MBD3-202ENST00000434436 NACA2Q9H009 215 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 HIPK3Q9H422 1215 aa23.91■■□□□ 1.42
MBD3-202ENST00000434436 WDR55Q9H6Y2 383 aaPredicted RBP23.91■■□□□ 1.42
MBD3-202ENST00000434436 HDAC3O15379 428 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 KLKB1P03952 638 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 PRAMEP78395 509 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 ACVR1Q04771 509 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 GALNT3Q14435 633 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 SLC14A2Q15849 920 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 TECRLQ5HYJ1 363 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 GABPB2Q8TAK5 448 aaPredicted RBP23.9■■□□□ 1.42
MBD3-202ENST00000434436 TBATAQ96M53 351 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 CEP295NLQ96MC4 621 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 NSMCE3Q96MG7 304 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 CLSTN3Q9BQT9 956 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 SUDS3Q9H7L9 328 aaPredicted RBP23.9■■□□□ 1.42
MBD3-202ENST00000434436 TCF7L2Q9NQB0 619 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 ARL5AQ9Y689 179 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 GOLGA8QA0A0J9YX86 632 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 GOLGA8OA6NCC3 632 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 GOLGA8NF8WBI6 632 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 BUD23O43709 281 aaKnown RBP23.9■■□□□ 1.42
MBD3-202ENST00000434436 PSMG1O95456 288 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 FGF1P05230 155 aa23.9■■□□□ 1.42
MBD3-202ENST00000434436 HLA-DPA1P20036 260 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms