RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 ZMIZ2Q8NF64 920 aa12.35□□□□□ -0.43
SEMA3F-206ENST00000434342 MAPK15Q8TD08 544 aa12.35□□□□□ -0.43
SEMA3F-206ENST00000434342 PLEKHA8Q96JA3 519 aa12.35□□□□□ -0.43
SEMA3F-206ENST00000434342 VPS39Q96JC1 886 aa12.35□□□□□ -0.43
SEMA3F-206ENST00000434342 HGH1Q9BTY7 390 aa12.35□□□□□ -0.43
SEMA3F-206ENST00000434342 EBF1Q9UH73 591 aa12.35□□□□□ -0.43
SEMA3F-206ENST00000434342 TNFRSF10AO00220 468 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 TMCC2O75069 709 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 CD1EP15812 388 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 PRKACBP22694 351 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 NUMBP49757 651 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 FRMD7Q6ZUT3 714 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 USP43Q70EL4 1123 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 TMEM135Q86UB9 458 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 TDRD5Q8NAT2 981 aaKnown RBP12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 IPMKQ8NFU5 416 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 ZC3H15Q8WU90 426 aaKnown RBP12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 CMTM5Q96DZ9 223 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 SGF29Q96ES7 293 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 TSNARE1Q96NA8 513 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 SLC2A13Q96QE2 648 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 CGREF1Q99674 301 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 HERC2P3Q9BVR0 1158 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 CDY2AQ9Y6F7 541 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 CDY1Q9Y6F8 540 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 A0A0G2JMZ2 1700 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 BRCA1P38398 1863 aaKnown RBP12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 TRIM13O60858 407 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 CHRNB1P11230 501 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 BDNFP23560 247 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 RPL10P27635 214 aaKnown RBP12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 EPHA3P29320 983 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 NAGLUP54802 743 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 CDH15P55291 814 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 ZNF460Q14592 562 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 GRM3Q14832 879 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 INSCQ1MX18 579 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 STXBP5Q5T5C0 1151 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 NEK10Q6ZWH5 1172 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 OR52B2Q96RD2 323 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 GATA5Q9BWX5 397 aaPredicted RBP12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 AP5M1Q9H0R1 490 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 FIS1Q9Y3D6 152 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 C17orf102A2RUQ5 167 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 CFLARO15519 480 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 HOXD8P13378 290 aaPredicted RBP12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 MPSTP25325 297 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 MSX2P35548 267 aaPredicted RBP12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 CLK3P49761 638 aaKnown RBP12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 SCNN1GP51170 649 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 CTBP1Q13363 440 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 HNRNPDQ14103 355 aaKnown RBP12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 PERM1Q5SV97 790 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 ARHGAP36Q6ZRI8 547 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 SLC38A6Q8IZM9 456 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 CCNYL1Q8N7R7 359 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 KCTD13Q8WZ19 329 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 CAAP1Q9H8G2 361 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 MIOSQ9NXC5 875 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 SORCS3Q9UPU3 1222 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 AP4B1Q9Y6B7 739 aa12.34□□□□□ -0.43
SEMA3F-206ENST00000434342 ZBTB14O43829 449 aa12.33□□□□□ -0.43
SEMA3F-206ENST00000434342 B3GAT3O94766 335 aa12.33□□□□□ -0.43
SEMA3F-206ENST00000434342 THP07101 528 aa12.33□□□□□ -0.43
SEMA3F-206ENST00000434342 PPARGP37231 505 aaPredicted RBP12.33□□□□□ -0.43
SEMA3F-206ENST00000434342 CRYBB1P53674 252 aaPredicted RBP12.33□□□□□ -0.43
SEMA3F-206ENST00000434342 NAB1Q13506 487 aa12.33□□□□□ -0.43
SEMA3F-206ENST00000434342 PHKG1Q16816 387 aa12.33□□□□□ -0.43
SEMA3F-206ENST00000434342 ERI1Q8IV48 349 aaKnown RBP12.33□□□□□ -0.43
SEMA3F-206ENST00000434342 C3orf58Q8NDZ4 430 aa12.33□□□□□ -0.43
SEMA3F-206ENST00000434342 OMDQ99983 421 aa12.33□□□□□ -0.43
SEMA3F-206ENST00000434342 NUF2Q9BZD4 464 aa12.33□□□□□ -0.43
SEMA3F-206ENST00000434342 GIN1Q9NXP7 522 aa12.33□□□□□ -0.43
SEMA3F-206ENST00000434342 FLRT1Q9NZU1 646 aa12.33□□□□□ -0.43
SEMA3F-206ENST00000434342 PMPCBO75439 489 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 TPPPO94811 219 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 VAPBO95292 243 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 MOCS2O96007 188 aaPredicted RBP12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 CCT8P50990 548 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 CRY1Q16526 586 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 SUN5Q8TC36 379 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 KCTD4Q8WVF5 259 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 MARK4Q96L34 752 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 LENG8Q96PV6 779 aaPredicted RBP12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 PTPN18Q99952 460 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 ACE2Q9BYF1 805 aaPredicted RBP12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 TCF7L2Q9NQB0 619 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 RUVBL2Q9Y230 463 aaKnown RBP12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 PCDHB12Q9Y5F1 795 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 CROCCQ5TZA2 2017 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 LOC285556D6RIA3 1793 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 G3V2L1 256 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 UGT1A6P19224 532 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 UGT1A1P22309 533 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 UGT1A4P22310 534 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 UGT1A3P35503 534 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 UGT1A5P35504 534 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 HARS2P49590 506 aaKnown RBP12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 GNA12Q03113 381 aa12.33□□□□□ -0.44
SEMA3F-206ENST00000434342 CDK18Q07002 472 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms