RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 LRRC49Q8IUZ0 686 aa19.09■□□□□ 0.65
RPUSD3-207ENST00000433555 CCDC50Q8IVM0 306 aa19.09■□□□□ 0.65
RPUSD3-207ENST00000433555 CCDC13Q8IYE1 715 aa19.09■□□□□ 0.65
RPUSD3-207ENST00000433555 TMEM145Q8NBT3 493 aa19.09■□□□□ 0.65
RPUSD3-207ENST00000433555 RAB7BQ96AH8 199 aa19.09■□□□□ 0.65
RPUSD3-207ENST00000433555 CALR3Q96L12 384 aaKnown RBP19.09■□□□□ 0.65
RPUSD3-207ENST00000433555 ZNF641Q96N77 438 aaPredicted RBP19.09■□□□□ 0.65
RPUSD3-207ENST00000433555 ZNF830Q96NB3 372 aaPredicted RBP19.09■□□□□ 0.65
RPUSD3-207ENST00000433555 MAK16Q9BXY0 300 aaKnown RBP19.09■□□□□ 0.65
RPUSD3-207ENST00000433555 CEP41Q9BYV8 373 aa19.09■□□□□ 0.65
RPUSD3-207ENST00000433555 PCDH12Q9NPG4 1184 aa19.09■□□□□ 0.65
RPUSD3-207ENST00000433555 SCUBE2Q9NQ36 999 aa19.09■□□□□ 0.65
RPUSD3-207ENST00000433555 AASDHPPTQ9NRN7 309 aa19.09■□□□□ 0.65
RPUSD3-207ENST00000433555 SNX11Q9Y5W9 270 aa19.09■□□□□ 0.65
RPUSD3-207ENST00000433555 ZRANB2O95218 330 aaKnown RBP eCLIP19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 ID4P47928 161 aa19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 BCL2L1Q07817 233 aa19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 HNRNPDQ14103 355 aaKnown RBP19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 GRM3Q14832 879 aa19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 PPP2R5EQ16537 467 aa19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 ALG1LQ6GMV1 187 aa19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 KIAA1161Q6NSJ0 714 aa19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 GCNT7Q6ZNI0 430 aa19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 TTC7BQ86TV6 843 aa19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 RCOR2Q8IZ40 523 aa19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 CCNYQ8ND76 341 aa19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 NSMCE1Q8WV22 266 aa19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 RBM41Q96IZ5 413 aaKnown RBP19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 SEMA3CQ99985 751 aa19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 WRAP53Q9BUR4 548 aaKnown RBP19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 RBM22Q9NW64 420 aaKnown RBP eCLIP19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 TPX2Q9ULW0 747 aaKnown RBP19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 DMTF1Q9Y222 760 aa19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 FNDC3AQ9Y2H6 1198 aaKnown RBP19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 PCDHGC4Q9Y5F7 938 aa19.08■□□□□ 0.64
RPUSD3-207ENST00000433555 CCDC66A2RUB6 948 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 IGLON5A6NGN9 336 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 H0Y8X5 98 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 TM4SF5O14894 197 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 DDX3YO15523 660 aaKnown RBP19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 HTRA2O43464 458 aaPredicted RBP19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 TSPAN6O43657 245 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 SYPP08247 313 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 CCNB1P14635 433 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 ZFXP17010 805 aaPredicted RBP19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 MMP12P39900 470 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 CTSKP43235 329 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 RPS21P63220 83 aaKnown RBP19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 IFI35P80217 286 aaPredicted RBP19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 NIPAL4Q0D2K0 466 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 RALGDSQ12967 914 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 PRKD1Q15139 912 aaPredicted RBP19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 UGP2Q16851 508 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 UAP1L1Q3KQV9 507 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 BRAT1Q6PJG6 821 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 BBS5Q8N3I7 341 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 CNTD1Q8N815 330 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 IL12RB2Q99665 862 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 HEMGNQ9BXL5 484 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 ANKRD6Q9Y2G4 727 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 ATP8A1Q9Y2Q0 1164 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 TTLL3Q9Y4R7 772 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 LRP4O75096 1905 aa19.07■□□□□ 0.64
RPUSD3-207ENST00000433555 DCDC2BA2VCK2 349 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 KCNK3O14649 394 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 VILLO15195 856 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 MMP20O60882 483 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 TGM2P21980 687 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 CD38P28907 300 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 CLDN2P57739 230 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 AP1B1Q10567 949 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 ZNF211Q13398 564 aaPredicted RBP19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 TFDP2Q14188 446 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 PDK1Q15118 436 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 PTPRRQ15256 657 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 TEAD4Q15561 434 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 TMEM52BQ4KMG9 183 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 BBS12Q6ZW61 710 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 PEX26Q7Z412 305 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 ADAT2Q7Z6V5 191 aaKnown RBP19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 SPATS2Q86XZ4 545 aaKnown RBP19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 TXLNBQ8N3L3 684 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 ARRDC2Q8TBH0 407 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 HCAR2Q8TDS4 363 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 SMIM14Q96QK8 99 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 KLF6Q99612 283 aaPredicted RBP19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 RTKNQ9BST9 563 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 C1QTNF2Q9BXJ5 285 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 POLR1EQ9GZS1 481 aaKnown RBP19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 CAAP1Q9H8G2 361 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 DNAAF2Q9NVR5 837 aaKnown RBP19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 AMFRQ9UKV5 643 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 GUCA1BQ9UMX6 200 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 COQ6Q9Y2Z9 468 aa19.06■□□□□ 0.64
RPUSD3-207ENST00000433555 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.05■□□□□ 0.64
RPUSD3-207ENST00000433555 PRAMEF26H0Y7S4 382 aa19.05■□□□□ 0.64
RPUSD3-207ENST00000433555 NEMP1O14524 444 aa19.05■□□□□ 0.64
RPUSD3-207ENST00000433555 RIOK3O14730 519 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms