RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 MMABQ96EY8 250 aaPredicted RBP6.21□□□□□ -1.42
USP54-206ENST00000433394 VCPIP1Q96JH7 1222 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 SERINC2Q96SA4 455 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 YME1L1Q96TA2 773 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 WDR83Q9BRX9 315 aaKnown RBP6.21□□□□□ -1.42
USP54-206ENST00000433394 PASKQ96RG2 1323 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 FRMD3A2A2Y4 597 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 CBY3A6NI87 242 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 LRRC3CA6NJW4 275 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 AKR1B15C9JRZ8 316 aaPredicted RBP6.2□□□□□ -1.42
USP54-206ENST00000433394 TAF4O00268 1085 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 HS6ST1O60243 411 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 ZC3H11AO75152 810 aaKnown RBP eCLIP6.2□□□□□ -1.427e-6■■■□□ 18.7
USP54-206ENST00000433394 BEST1O76090 585 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 CD58P19256 250 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 CLCN5P51795 746 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 F2RL1P55085 397 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 FGFBP1Q14512 234 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 NTRK2Q16620 822 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 HEPHL1Q6MZM0 1159 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 ZNF788Q6ZQV5 615 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 KRT74Q7RTS7 529 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 Q8N1X5 172 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 ARHGEF26Q96DR7 871 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 MXRA8Q9BRK3 442 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 MXD3Q9BW11 206 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 POLR1BQ9H9Y6 1135 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 SCPEP1Q9HB40 452 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 PDGFCQ9NRA1 345 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 MRPL15Q9P015 296 aaKnown RBP6.2□□□□□ -1.42
USP54-206ENST00000433394 ADAM18Q9Y3Q7 739 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 MAU2Q9Y6X3 613 aa6.2□□□□□ -1.42
USP54-206ENST00000433394 A0A1W2PQ09 198 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 AGAP14A8MT82 685 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 P4HA2O15460 535 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 GPC4O75487 556 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 FSHBP01225 129 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 WNT1P04628 370 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 PRR35P0CG20 571 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 CTSAP10619 480 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 RYKP34925 604 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 BUD31P41223 144 aaPredicted RBP6.19□□□□□ -1.42
USP54-206ENST00000433394 PTH2RP49190 550 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 EFNA5P52803 228 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 CLDN2P57739 230 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 ZBED6P86452 979 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 TFF2Q03403 129 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 PSMD6Q15008 389 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 SHBQ15464 509 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 KRT24Q2M2I5 525 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 C6orf141Q5SZD1 244 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 SLC30A6Q6NXT4 461 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 GLDNQ6ZMI3 551 aaPredicted RBP6.19□□□□□ -1.42
USP54-206ENST00000433394 RD3Q7Z3Z2 195 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 PRPF39Q86UA1 669 aaKnown RBP6.19□□□□□ -1.42
USP54-206ENST00000433394 MCPH1Q8NEM0 835 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 PRSS3P2Q8NHM4 247 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 ZNF570Q96NI8 536 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 WDFY2Q96P53 400 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 SIGLEC11Q96RL6 698 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 B3GNT4Q9C0J1 378 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 MAGEE1Q9HCI5 957 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 NRIP3Q9NQ35 241 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 SLC35C2Q9NQQ7 365 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 THSD1Q9NS62 852 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 PLK2Q9NYY3 685 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 MORF4L1Q9UBU8 362 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 CFDP1Q9UEE9 299 aaPredicted RBP6.19□□□□□ -1.42
USP54-206ENST00000433394 PLEKHB1Q9UF11 243 aaPredicted RBP6.19□□□□□ -1.42
USP54-206ENST00000433394 NDRG3Q9UGV2 375 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 ERVK-11Q9UQG0 969 aa6.19□□□□□ -1.42
USP54-206ENST00000433394 A8MZ25 164 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 KLRF2D3W0D1 207 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 NPIPB11E5RHQ5 1161 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 HSPB6O14558 160 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 NKX2-2O95096 273 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 TOP3BO95985 862 aaKnown RBP6.18□□□□□ -1.42
USP54-206ENST00000433394 ACTN1P12814 892 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 TNFSF8P32971 234 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 ACVRL1P37023 503 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 CDH12P55289 794 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 TMPRSS3P57727 454 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 CEBPZQ03701 1054 aaKnown RBP6.18□□□□□ -1.42
USP54-206ENST00000433394 KLF10Q13118 480 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 SMTNL2Q2TAL5 461 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 RAB41Q5JT25 222 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 NAA16Q6N069 864 aaPredicted RBP6.18□□□□□ -1.42
USP54-206ENST00000433394 LCTLQ6UWM7 567 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 ZNF782Q6ZMW2 699 aaPredicted RBP6.18□□□□□ -1.42
USP54-206ENST00000433394 TRAPPC11Q7Z392 1133 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 DHX40Q8IX18 779 aaKnown RBP6.18□□□□□ -1.42
USP54-206ENST00000433394 HACE1Q8IYU2 909 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 BICD2Q8TD16 824 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 TMEM47Q9BQJ4 181 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 C1QTNF1Q9BXJ1 281 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 LHPPQ9H008 270 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 PLEKHA4Q9H4M7 779 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 RANGRFQ9HD47 186 aaPredicted RBP6.18□□□□□ -1.42
USP54-206ENST00000433394 PLSCR4Q9NRQ2 329 aa6.18□□□□□ -1.42
USP54-206ENST00000433394 ANKRD10Q9NXR5 420 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms