RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 HK3P52790 923 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 CLDN6P56747 220 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 GSCP56915 257 aaPredicted RBP8.39□□□□□ -1.07
CDH13-203ENST00000431540 CLDN2P57739 230 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 POLR2LP62875 67 aaKnown RBP8.39□□□□□ -1.07
CDH13-203ENST00000431540 SQSTM1Q13501 440 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 BECN1Q14457 450 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 CDKN3Q16667 212 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 MAN2A1Q16706 1144 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 ARHGAP44Q17R89 818 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 POM121L1PQ3SYA9 428 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 TMCO4Q5TGY1 634 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 MANEALQ5VSG8 457 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 OTUD1Q5VV17 481 aaPredicted RBP8.39□□□□□ -1.07
CDH13-203ENST00000431540 KLHL10Q6JEL2 608 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 GDPD4Q6W3E5 623 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 TRIM72Q6ZMU5 477 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 TTC7BQ86TV6 843 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 CIR1Q86X95 450 aaPredicted RBP8.39□□□□□ -1.07
CDH13-203ENST00000431540 XYLT1Q86Y38 959 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 PHACTR4Q8IZ21 702 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 ARL10Q8N8L6 244 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 LMX1AQ8TE12 382 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 NTAN1Q96AB6 310 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 SGF29Q96ES7 293 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 ATXN7L3BQ96GX2 97 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 EIF3CQ99613 913 aaKnown RBP8.39□□□□□ -1.07
CDH13-203ENST00000431540 DPYSL5Q9BPU6 564 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 SPON2Q9BUD6 331 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 PDCL3Q9H2J4 239 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 CPNE5Q9HCH3 593 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 APOBEC3BQ9UH17 382 aaKnown RBP8.39□□□□□ -1.07
CDH13-203ENST00000431540 KLF15Q9UIH9 416 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 DNAJC12Q9UKB3 198 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 CA5BQ9Y2D0 317 aa8.39□□□□□ -1.07
CDH13-203ENST00000431540 UBR5O95071 2799 aaPredicted RBP8.38□□□□□ -1.07
CDH13-203ENST00000431540 SYNJ2BP-COX16A0A087WUM0 186 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 A0A1W2PQ67 120 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 WASH4PA8MWX3 477 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 I6L893 689 aaPredicted RBP8.38□□□□□ -1.07
CDH13-203ENST00000431540 PDE2AO00408 941 aaPredicted RBP8.38□□□□□ -1.07
CDH13-203ENST00000431540 RAD51BO15315 384 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 SPINT1O43278 529 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 SRGAP2O75044 1071 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 GCATO75600 419 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 GRAP2O75791 330 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 TNFSF15O95150 251 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 RASGRP1O95267 797 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 CALCAP01258 141 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 LIPCP11150 499 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 KELP23276 732 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 ERCC5P28715 1186 aaPredicted RBP8.38□□□□□ -1.07
CDH13-203ENST00000431540 IRAK1P51617 712 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 ADKP55263 362 aaKnown RBP8.38□□□□□ -1.07
CDH13-203ENST00000431540 ZFP36L1Q07352 338 aaKnown RBP8.38□□□□□ -1.07
CDH13-203ENST00000431540 NSUN2Q08J23 767 aaKnown RBP eCLIP8.38□□□□□ -1.07
CDH13-203ENST00000431540 CLN3Q13286 438 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 LRRC14Q15048 493 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 PRRT3Q5FWE3 981 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 C3orf38Q5JPI3 329 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 FAXCQ5TGI0 409 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 TMEM164Q5U3C3 297 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 PPP1R2P3Q6NXS1 205 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 GUSBP11Q6P575 273 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 BRAT1Q6PJG6 821 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 PARS2Q7L3T8 475 aaKnown RBP8.38□□□□□ -1.07
CDH13-203ENST00000431540 RAB11FIP2Q7L804 512 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 SLC47A2Q86VL8 602 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 NLRP14Q86W24 1093 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 IRF2BP1Q8IU81 584 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 SLC35F3Q8IY50 421 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 FBXO39Q8N4B4 442 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 SVOPQ8N4V2 548 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 GPR156Q8NFN8 814 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 CXorf40AQ8TE69 158 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 KLK6Q92876 244 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 GDAP1L1Q96MZ0 367 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 GFM1Q96RP9 751 aaKnown RBP8.38□□□□□ -1.07
CDH13-203ENST00000431540 TUBGCP5Q96RT8 1024 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 RBM15Q96T37 977 aaKnown RBP eCLIP8.38□□□□□ -1.07
CDH13-203ENST00000431540 TBCBQ99426 244 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 CCDC3Q9BQI4 270 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 CRACR2AQ9BSW2 395 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 STK33Q9BYT3 514 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 EDEM3Q9BZQ6 932 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 ADNPQ9H2P0 1102 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 NDST4Q9H3R1 872 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 GDPD2Q9HCC8 539 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 SIX2Q9NPC8 291 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 PLCB1Q9NQ66 1216 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 ANLNQ9NQW6 1124 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 STARD5Q9NSY2 213 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 MPP6Q9NZW5 540 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 COX16Q9P0S2 106 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 IL17BQ9UHF5 180 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 TUBD1Q9UJT1 453 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 DOLKQ9UPQ8 538 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 CTNND2Q9UQB3 1225 aa8.38□□□□□ -1.07
CDH13-203ENST00000431540 PTPN13Q12923 2485 aa8.37□□□□□ -1.07
CDH13-203ENST00000431540 TSPAN11A1L157 253 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms