RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 PIGNO95427 931 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 MBD3O95983 291 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 MPOP05164 745 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 XPAP23025 273 aaPredicted RBP16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 PSMA2P25787 234 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 LSSP48449 732 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 ADKP55263 362 aaKnown RBP16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 TYRO3Q06418 890 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 ELP6Q0PNE2 266 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 C1orf61Q13536 156 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 ACAP1Q15027 740 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 PRRT3Q5FWE3 981 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 ERMARDQ5T6L9 678 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 FAXCQ5TGI0 409 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 EFL1Q7Z2Z2 1120 aaKnown RBP16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 PHACTR4Q8IZ21 702 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 LSMEM2Q8N112 164 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 ARFGAP1Q8N6T3 406 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 CELF6Q96J87 481 aaKnown RBP16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 ZNF641Q96N77 438 aaPredicted RBP16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 EIF3CQ99613 913 aaKnown RBP16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 NCAPGQ9BPX3 1015 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 BOCQ9BWV1 1114 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 SLC13A1Q9BZW2 595 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 SLC39A8Q9C0K1 460 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 NAT10Q9H0A0 1025 aaKnown RBP16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 DHX35Q9H5Z1 703 aaKnown RBP16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 APOBEC3BQ9UH17 382 aaKnown RBP16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 AP4E1Q9UPM8 1137 aa16.33■□□□□ 0.2
AC055876.3-201ENST00000431496 HELZ2Q9BYK8 2649 aaKnown RBP16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 TMEM191CA6NGB0 347 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 TMEM110-MUSTN1A8MSY1 372 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 EEF2KO00418 725 aaKnown RBP16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 LZTS3O60299 673 aaPredicted RBP16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 TGM2P21980 687 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 CSNK1DP48730 415 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 PEX5P50542 639 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 PAPOLAP51003 745 aaKnown RBP16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 PPARDQ03181 441 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 LRRC14Q15048 493 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 IRF4Q15306 451 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 NR0B2Q15466 257 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 CA9Q16790 459 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 ISXQ2M1V0 245 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 WSCD2Q2TBF2 565 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 GUSBP11Q6P575 273 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 MACC1Q6ZN28 852 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 CAMK1DQ8IU85 385 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 TPCN2Q8NHX9 752 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 SHROOM3Q8TF72 1996 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 ZNF578Q96N58 590 aaPredicted RBP16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 LRRC61Q9BV99 259 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 CLPBQ9H078 707 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 POLR1BQ9H9Y6 1135 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 PCDH12Q9NPG4 1184 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 PCSK1NQ9UHG2 260 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 COQ6Q9Y2Z9 468 aa16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 GCN1Q92616 2671 aaKnown RBP16.32■□□□□ 0.2
AC055876.3-201ENST00000431496 MGAQ8IWI9 3026 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 ARHGAP42A6NI28 874 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 LRRC53A6NM62 1247 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 YY2O15391 372 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 DAPK3O43293 454 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 ATMINO43313 823 aaPredicted RBP16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 DXOO77932 396 aaKnown RBP16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 FTLP02792 175 aaPredicted RBP16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 ANXA6P08133 673 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 GZMAP12544 262 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 TSHRP16473 764 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 RPIAP49247 311 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 GABREP78334 506 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 CCDC173Q0VFZ6 552 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 ANO6Q4KMQ2 910 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 AFMIDQ63HM1 303 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 ERAP2Q6P179 960 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 BRAT1Q6PJG6 821 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 ZNF571Q7Z3V5 609 aaPredicted RBP16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 SRLQ86TD4 932 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 SLC35F3Q8IY50 421 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 GLMNQ92990 594 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 TUBGCP5Q96RT8 1024 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 UBL7Q96S82 380 aaPredicted RBP16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 PEBP4Q96S96 227 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 KCTD15Q96SI1 283 aaPredicted RBP16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 BPIFA3Q9BQP9 254 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 HAUS4Q9H6D7 363 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 AIPL1Q9NZN9 384 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 KALRNO60229 2985 aa16.31■□□□□ 0.2
AC055876.3-201ENST00000431496 MUSKO15146 869 aa16.3■□□□□ 0.2
AC055876.3-201ENST00000431496 PALMO75781 387 aa16.3■□□□□ 0.2
AC055876.3-201ENST00000431496 RNF8O76064 485 aa16.3■□□□□ 0.2
AC055876.3-201ENST00000431496 C6P13671 934 aa16.3■□□□□ 0.2
AC055876.3-201ENST00000431496 ERCC2P18074 760 aa16.3■□□□□ 0.2
AC055876.3-201ENST00000431496 MIPP30301 263 aa16.3■□□□□ 0.2
AC055876.3-201ENST00000431496 RGRP47804 291 aa16.3■□□□□ 0.2
AC055876.3-201ENST00000431496 HCAR3P49019 387 aa16.3■□□□□ 0.2
AC055876.3-201ENST00000431496 LIG3P49916 1009 aa16.3■□□□□ 0.2
AC055876.3-201ENST00000431496 BLKP51451 505 aa16.3■□□□□ 0.2
AC055876.3-201ENST00000431496 TLE3Q04726 772 aa16.3■□□□□ 0.2
AC055876.3-201ENST00000431496 NSUN2Q08J23 767 aaKnown RBP eCLIP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms