RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PDILTQ8N807 584 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 C1orf131Q8NDD1 294 aaKnown RBP3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 CMASQ8NFW8 434 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 BICD2Q8TD16 824 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 POMGNT1Q8WZA1 660 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 CMTM3Q96MX0 182 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 FIZ1Q96SL8 496 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 FAM118BQ9BPY3 351 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 WDR26Q9H7D7 661 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 MAP6D1Q9H9H5 199 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 DDX4Q9NQI0 724 aaKnown RBP3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 THSD1Q9NS62 852 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 PLEKHB1Q9UF11 243 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 ZNF215Q9UL58 517 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 PCDHGB4Q9UN71 923 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 A3GALT2U3KPV4 340 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 A0A096LPK6 155 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 SMIM35A0A1B0GVV1 85 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 A0A1W2PR77 199 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 MANSC4A6NHS7 340 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 CGB1A6NKQ9 187 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 TTC36A6NLP5 189 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 MASP2O00187 686 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 ZNF500O60304 480 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 UGDHO60701 494 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 IPO7O95373 1038 aaKnown RBP3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 FGF2P09038 288 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 CERS1P27544 350 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 F2RL1P55085 397 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 CDH8P55286 799 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 PSMC6P62333 389 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 FAM27E3Q08E93 113 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 FRG1Q14331 258 aaKnown RBP3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 PCLAFQ15004 111 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 SMTNL2Q2TAL5 461 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 PCGF3Q3KNV8 242 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 TMEM119Q4V9L6 283 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 ALG10Q5BKT4 473 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 ALG10BQ5I7T1 473 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 NCAPH2Q6IBW4 605 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 RPUSD3Q6P087 351 aaKnown RBP3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 TMEM154Q6P9G4 183 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 QSOX2Q6ZRP7 698 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 TRILQ7L0X0 811 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 ADGRA1Q86SQ6 560 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 TSPAN33Q86UF1 283 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 NOXA1Q86UR1 476 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 TICAM1Q8IUC6 712 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 KIAA2013Q8IYS2 634 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 ADGRF4Q8IZF3 695 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 SCML4Q8N228 414 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 NKAIN3Q8N8D7 197 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 TEX45Q8NA69 505 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 TMEM163Q8TC26 289 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 SGCDQ92629 289 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 ATOH1Q92858 354 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 SMARCE1Q969G3 411 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 COQ8BQ96D53 544 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 RNF183Q96D59 192 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 ARHGEF26Q96DR7 871 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 CHFRQ96EP1 664 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 SLITRK1Q96PX8 696 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 YME1L1Q96TA2 773 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 MXRA8Q9BRK3 442 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 TUBB6Q9BUF5 446 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 MSTO1Q9BUK6 570 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 MXD3Q9BW11 206 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 SCNM1Q9BWG6 230 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 C1QTNF5Q9BXJ0 243 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 TXLNGYQ9BZA5 131 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 B3GNT4Q9C0J1 378 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 KAT14Q9H8E8 782 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 TMEM45AQ9NWC5 275 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 ANKRD10Q9NXR5 420 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 DLGAP2Q9P1A6 1054 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 NDRG3Q9UGV2 375 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 TMEM5Q9Y2B1 443 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 SLC4A4Q9Y6R1 1079 aa3.28□□□□□ -1.88
HMGB1P27-201ENST00000431429 FAM237AA0A1B0GTK4 181 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 A0A1W2PQ09 198 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 DPPA5A6NC42 116 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 A6NNC1 897 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 BTBD18B2RXH4 712 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 B4DLN1 442 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 PPP6CO00743 305 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 SH2B2O14492 632 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 MDM4O15151 490 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 P4HA2O15460 535 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 PAPSS1O43252 624 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 SLC25A17O43808 307 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 ENTPD3O75355 529 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 BEST1O76090 585 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 STARD3NLO95772 234 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 IFNA2P01563 188 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 DNTTP04053 509 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 TUBBP07437 444 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 PCNAP12004 261 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 SELLP14151 372 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 RRM1P23921 792 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 HOXD9P28356 352 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms