RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 PEX11BO96011 259 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 FTLP02792 175 aaPredicted RBP11.9□□□□□ -0.5
HDAC4-202ENST00000430200 C1SP09871 688 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 C6P13671 934 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 JUPP14923 745 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 ERCC2P18074 760 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 TNFAIP3P21580 790 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 HNF1BP35680 557 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 RABIFP47224 123 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 PDX1P52945 283 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 AIF1P55008 147 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 DAB2P98082 770 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 ILKQ13418 452 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 C1orf61Q13536 156 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 NR1I3Q14994 352 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 RTP5Q14D33 572 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 PTPRRQ15256 657 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 KLHL40Q2TBA0 621 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 WSCD2Q2TBF2 565 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 PPP6R3Q5H9R7 873 aaPredicted RBP11.9□□□□□ -0.5
HDAC4-202ENST00000430200 PERM1Q5SV97 790 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 SFTPA2Q8IWL1 248 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 PGBD5Q8N414 524 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 PLA2G15Q8NCC3 412 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 ASB12Q8WXK4 309 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 ARHGEF26Q96DR7 871 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 IFT43Q96FT9 208 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 PDXPQ96GD0 296 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 VCPIP1Q96JH7 1222 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 DCBLD2Q96PD2 775 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 CATSPERBQ9H7T0 1116 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 CBX8Q9HC52 389 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 PARVAQ9NVD7 372 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 MYO1AQ9UBC5 1043 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 DKK3Q9UBP4 350 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 CLCA2Q9UQC9 943 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 ANKRD62A6NC57 917 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 FPGTO14772 594 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 AQP9O43315 295 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 OPA1O60313 960 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 JUNDP17535 347 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 TGM2P21980 687 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 NDST2P52849 883 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 SLC25A11Q02978 314 aaKnown RBP11.89□□□□□ -0.51
HDAC4-202ENST00000430200 CCDC15Q0P6D6 951 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 CDKN3Q16667 212 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 TMEM52BQ4KMG9 183 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 SOWAHCQ53LP3 525 aaPredicted RBP11.89□□□□□ -0.51
HDAC4-202ENST00000430200 ERMARDQ5T6L9 678 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 MACC1Q6ZN28 852 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 TTC7BQ86TV6 843 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 SLC35F3Q8IY50 421 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 PHACTR4Q8IZ21 702 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 FAM181AQ8N9Y4 354 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 IFI44Q8TCB0 444 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 LMX1AQ8TE12 382 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 FNIP1Q8TF40 1166 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 CASKIN2Q8WXE0 1202 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 ECHDC3Q96DC8 303 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 CPEB1Q9BZB8 566 aaKnown RBP11.89□□□□□ -0.51
HDAC4-202ENST00000430200 ISCUQ9H1K1 167 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 SCUBE2Q9NQ36 999 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 APOBEC3BQ9UH17 382 aaKnown RBP11.89□□□□□ -0.51
HDAC4-202ENST00000430200 RABGEF1Q9UJ41 708 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 NENFQ9UMX5 172 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 OR1A2Q9Y585 309 aa11.89□□□□□ -0.51
HDAC4-202ENST00000430200 HELZ2Q9BYK8 2649 aaKnown RBP11.89□□□□□ -0.51
HDAC4-202ENST00000430200 UNC13CQ8NB66 2214 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 DFFAO00273 331 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 TRAFD1O14545 582 aaPredicted RBP11.88□□□□□ -0.51
HDAC4-202ENST00000430200 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
HDAC4-202ENST00000430200 TM7SF2O76062 418 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 MT-CO3P00414 261 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 HNRNPKP61978 463 aaKnown RBP eCLIP11.88□□□□□ -0.51
HDAC4-202ENST00000430200 KLHL30Q0D2K2 578 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 SLC10A7Q0GE19 358 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 SGCGQ13326 291 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 IHHQ14623 411 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 UGP2Q16851 508 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 ALG11Q2TAA5 492 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 PRRT3Q5FWE3 981 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 FAM182AQ5T1J6 154 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 ZCCHC8Q6NZY4 707 aaKnown RBP11.88□□□□□ -0.51
HDAC4-202ENST00000430200 KYQ8NBH2 561 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 CXorf40AQ8TE69 158 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 SMIM14Q96QK8 99 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 NCAPGQ9BPX3 1015 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 BOCQ9BWV1 1114 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 THAP2Q9H0W7 228 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 SUV39H2Q9H5I1 410 aa11.88□□□□□ -0.51
HDAC4-202ENST00000430200 ZNF106Q9H2Y7 1883 aaKnown RBP11.87□□□□□ -0.51
HDAC4-202ENST00000430200 A0A087X0T9 212 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 A0A0U1RQS6 177 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 CSO75390 466 aaKnown RBP11.87□□□□□ -0.51
HDAC4-202ENST00000430200 GYPCP04921 128 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 MPOP05164 745 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 PCCBP05166 539 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 CD48P09326 243 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 FAM228BP0C875 321 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 GZMAP12544 262 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms