RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 LIMA1Q9UHB6 759 aaKnown RBP15.06■□□□□ 0
MSH5-208ENST00000429846 FZD10Q9ULW2 581 aa15.06■□□□□ 0
MSH5-208ENST00000429846 TSPAN11A1L157 253 aa15.05■□□□□ -0
MSH5-208ENST00000429846 TMEM110-MUSTN1A8MSY1 372 aa15.05■□□□□ -0
MSH5-208ENST00000429846 EIF3CLB5ME19 914 aaKnown RBP15.05■□□□□ -0
MSH5-208ENST00000429846 MLLT3P42568 568 aaPredicted RBP15.05■□□□□ -0
MSH5-208ENST00000429846 CXADRP78310 365 aa15.05■□□□□ -0
MSH5-208ENST00000429846 MYL5Q02045 173 aa15.05■□□□□ -0
MSH5-208ENST00000429846 KLHL40Q2TBA0 621 aa15.05■□□□□ -0
MSH5-208ENST00000429846 TMEM52BQ4KMG9 183 aa15.05■□□□□ -0
MSH5-208ENST00000429846 C3orf38Q5JPI3 329 aa15.05■□□□□ -0
MSH5-208ENST00000429846 LRRC73Q5JTD7 316 aa15.05■□□□□ -0
MSH5-208ENST00000429846 ESRP1Q6NXG1 681 aaKnown RBP15.05■□□□□ -0
MSH5-208ENST00000429846 BRAT1Q6PJG6 821 aa15.05■□□□□ -0
MSH5-208ENST00000429846 SDR16C5Q8N3Y7 309 aa15.05■□□□□ -0
MSH5-208ENST00000429846 KCNE4Q8WWG9 221 aa15.05■□□□□ -0
MSH5-208ENST00000429846 TUBGCP5Q96RT8 1024 aa15.05■□□□□ -0
MSH5-208ENST00000429846 EIF3CQ99613 913 aaKnown RBP15.05■□□□□ -0
MSH5-208ENST00000429846 AGPAT1Q99943 283 aa15.05■□□□□ -0
MSH5-208ENST00000429846 DPH1Q9BZG8 443 aa15.05■□□□□ -0
MSH5-208ENST00000429846 LMBRD1Q9NUN5 540 aa15.05■□□□□ -0
MSH5-208ENST00000429846 LHX3Q9UBR4 397 aa15.05■□□□□ -0
MSH5-208ENST00000429846 UBA2Q9UBT2 640 aaPredicted RBP15.05■□□□□ -0
MSH5-208ENST00000429846 PCDHGA8Q9Y5G5 932 aa15.05■□□□□ -0
MSH5-208ENST00000429846 ANKRD36A6QL64 1941 aa15.04■□□□□ -0
MSH5-208ENST00000429846 LRRC10BA6NIK2 292 aa15.04■□□□□ -0
MSH5-208ENST00000429846 ERVH48-1M5A8F1 160 aa15.04■□□□□ -0
MSH5-208ENST00000429846 MUSKO15146 869 aa15.04■□□□□ -0
MSH5-208ENST00000429846 GCATO75600 419 aa15.04■□□□□ -0
MSH5-208ENST00000429846 ALPIP09923 528 aa15.04■□□□□ -0
MSH5-208ENST00000429846 TIMP2P16035 220 aa15.04■□□□□ -0
MSH5-208ENST00000429846 HTR1BP28222 390 aa15.04■□□□□ -0
MSH5-208ENST00000429846 RBMS1P29558 406 aaKnown RBP15.04■□□□□ -0
MSH5-208ENST00000429846 NDST2P52849 883 aa15.04■□□□□ -0
MSH5-208ENST00000429846 ADKP55263 362 aaKnown RBP15.04■□□□□ -0
MSH5-208ENST00000429846 TPI1P60174 286 aa15.04■□□□□ -0
MSH5-208ENST00000429846 RPL7AP62424 266 aaKnown RBP15.04■□□□□ -0
MSH5-208ENST00000429846 UBXN1Q04323 297 aa15.04■□□□□ -0
MSH5-208ENST00000429846 LRRC14Q15048 493 aa15.04■□□□□ -0
MSH5-208ENST00000429846 AGERQ15109 404 aa15.04■□□□□ -0
MSH5-208ENST00000429846 IRF4Q15306 451 aa15.04■□□□□ -0
MSH5-208ENST00000429846 ELOCQ15369 112 aa15.04■□□□□ -0
MSH5-208ENST00000429846 UGP2Q16851 508 aa15.04■□□□□ -0
MSH5-208ENST00000429846 PPP1R15BQ5SWA1 713 aa15.04■□□□□ -0
MSH5-208ENST00000429846 FAXCQ5TGI0 409 aa15.04■□□□□ -0
MSH5-208ENST00000429846 ERAP2Q6P179 960 aa15.04■□□□□ -0
MSH5-208ENST00000429846 DCUN1D2Q6PH85 259 aa15.04■□□□□ -0
MSH5-208ENST00000429846 LVRNQ6Q4G3 990 aa15.04■□□□□ -0
MSH5-208ENST00000429846 SLC35F3Q8IY50 421 aa15.04■□□□□ -0
MSH5-208ENST00000429846 ATL2Q8NHH9 583 aa15.04■□□□□ -0
MSH5-208ENST00000429846 SCG3Q8WXD2 468 aaKnown RBP15.04■□□□□ -0
MSH5-208ENST00000429846 CCDC97Q96F63 343 aaPredicted RBP15.04■□□□□ -0
MSH5-208ENST00000429846 ZNF641Q96N77 438 aaPredicted RBP15.04■□□□□ -0
MSH5-208ENST00000429846 WRAP53Q9BUR4 548 aaKnown RBP15.04■□□□□ -0
MSH5-208ENST00000429846 KLC2Q9H0B6 622 aa15.04■□□□□ -0
MSH5-208ENST00000429846 TCEAL2Q9H3H9 227 aaPredicted RBP15.04■□□□□ -0
MSH5-208ENST00000429846 LRRC19Q9H756 370 aa15.04■□□□□ -0
MSH5-208ENST00000429846 PDFQ9HBH1 243 aa15.04■□□□□ -0
MSH5-208ENST00000429846 MBNL1Q9NR56 388 aaKnown RBP15.04■□□□□ -0
MSH5-208ENST00000429846 ANO10Q9NW15 660 aa15.04■□□□□ -0
MSH5-208ENST00000429846 PNMA8BQ9ULN7 279 aaPredicted RBP15.04■□□□□ -0
MSH5-208ENST00000429846 SATB2Q9UPW6 733 aa15.04■□□□□ -0
MSH5-208ENST00000429846 ENTPD2Q9Y5L3 495 aa15.04■□□□□ -0
MSH5-208ENST00000429846 CAPN8A6NHC0 703 aa15.03■□□□□ -0
MSH5-208ENST00000429846 YY2O15391 372 aa15.03■□□□□ -0
MSH5-208ENST00000429846 C6P13671 934 aa15.03■□□□□ -0
MSH5-208ENST00000429846 TSHRP16473 764 aa15.03■□□□□ -0
MSH5-208ENST00000429846 FERP16591 822 aa15.03■□□□□ -0
MSH5-208ENST00000429846 HK3P52790 923 aa15.03■□□□□ -0
MSH5-208ENST00000429846 RHDQ02161 417 aa15.03■□□□□ -0
MSH5-208ENST00000429846 SPIDRQ14159 915 aa15.03■□□□□ -0
MSH5-208ENST00000429846 STX1AQ16623 288 aa15.03■□□□□ -0
MSH5-208ENST00000429846 PERM1Q5SV97 790 aa15.03■□□□□ -0
MSH5-208ENST00000429846 CFAP58Q5T655 872 aa15.03■□□□□ -0
MSH5-208ENST00000429846 SASS6Q6UVJ0 657 aa15.03■□□□□ -0
MSH5-208ENST00000429846 MCOLN2Q8IZK6 566 aa15.03■□□□□ -0
MSH5-208ENST00000429846 ARL10Q8N8L6 244 aa15.03■□□□□ -0
MSH5-208ENST00000429846 ATXN7L3BQ96GX2 97 aa15.03■□□□□ -0
MSH5-208ENST00000429846 VCPIP1Q96JH7 1222 aa15.03■□□□□ -0
MSH5-208ENST00000429846 EXOC2Q96KP1 924 aa15.03■□□□□ -0
MSH5-208ENST00000429846 SLC46A1Q96NT5 459 aa15.03■□□□□ -0
MSH5-208ENST00000429846 CLPBQ9H078 707 aa15.03■□□□□ -0
MSH5-208ENST00000429846 SUV39H2Q9H5I1 410 aa15.03■□□□□ -0
MSH5-208ENST00000429846 PADI4Q9UM07 663 aa15.03■□□□□ -0
MSH5-208ENST00000429846 DOLKQ9UPQ8 538 aa15.03■□□□□ -0
MSH5-208ENST00000429846 HELZ2Q9BYK8 2649 aaKnown RBP15.03■□□□□ -0
MSH5-208ENST00000429846 ARHGAP42A6NI28 874 aa15.02■□□□□ -0
MSH5-208ENST00000429846 PRAMEF11O60813 436 aa15.02■□□□□ -0
MSH5-208ENST00000429846 C1QL1O75973 258 aa15.02■□□□□ -0
MSH5-208ENST00000429846 RASGRP1O95267 797 aa15.02■□□□□ -0
MSH5-208ENST00000429846 PIGNO95427 931 aa15.02■□□□□ -0
MSH5-208ENST00000429846 PRB1P04280 392 aa15.02■□□□□ -0
MSH5-208ENST00000429846 CDK11BP21127 795 aaKnown RBP15.02■□□□□ -0
MSH5-208ENST00000429846 MMP12P39900 470 aa15.02■□□□□ -0
MSH5-208ENST00000429846 CSNK1DP48730 415 aa15.02■□□□□ -0
MSH5-208ENST00000429846 C1orf61Q13536 156 aa15.02■□□□□ -0
MSH5-208ENST00000429846 NFATC4Q14934 902 aa15.02■□□□□ -0
MSH5-208ENST00000429846 CYTH1Q15438 398 aa15.02■□□□□ -0
MSH5-208ENST00000429846 WSCD2Q2TBF2 565 aa15.02■□□□□ -0
MSH5-208ENST00000429846 ACAD10Q6JQN1 1059 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms