RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	INSIG1	O15503	277 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	RNF8	O76064	485 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	CSF2	P04141	144 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	MYBL1	P10243	752 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	TIMP2	P16035	220 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	PFN3	P60673	137 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	FANCC	Q00597	558 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	SGCG	Q13326	291 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	RFX8	Q6ZV50	586 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	TTC7B	Q86TV6	843 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	LUZP1	Q86V48	1076 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	ARHGAP12	Q8IWW6	846 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	ZNF248	Q8NDW4	579 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	HCAR2	Q8TDS4	363 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	CENPT	Q96BT3	561 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	ZNF653	Q96CK0	615 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	TRIM11	Q96F44	468 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	CELF6	Q96J87	481 aa	Known RBP	17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	ZNF578	Q96N58	590 aa	Predicted RBP	17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	LGMN	Q99538	433 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	SLC39A8	Q9C0K1	460 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	ATM	Q13315	3056 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	TENM4	Q6N022	2769 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	TSPAN11	A1L157	253 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	ARHGAP42	A6NI28	874 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	ERVH48-1	M5A8F1	160 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	NEMP1	O14524	444 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	FPGT	O14772	594 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	PRPSAP2	O60256	369 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	NME1	P15531	152 aa	Known RBP	17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	ERCC2	P18074	760 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	PCK1	P35558	622 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	HCAR3	P49019	387 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	PAPOLA	P51003	745 aa	Known RBP	17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	SUOX	P51687	545 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	ZNF135	P52742	658 aa	Predicted RBP	17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	HNRNPK	P61978	463 aa	Known RBP eCLIP	17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	DAB2	P98082	770 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	GRM3	Q14832	879 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	HS1BP3	Q53T59	392 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	TAF1B	Q53T94	588 aa	Predicted RBP	17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	LRRC73	Q5JTD7	316 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	TPRG1L	Q5T0D9	272 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	PARG	Q86W56	976 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	LSMEM2	Q8N112	164 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	SYN2	Q92777	582 aa	Predicted RBP	17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	WBP1	Q96G27	269 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	EXOC2	Q96KP1	924 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	NCAPG	Q9BPX3	1015 aa		17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	MRPL47	Q9HD33	250 aa	Known RBP	17.92	■□□□□ 0.46
MRPL28-203	ENST00000429738	MAST4	O15021	2626 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738		J3QKU1	62 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	SCAMP1	O15126	338 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	PIGN	O95427	931 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	ITIH2	P19823	946 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	PCBP4	P57723	403 aa	Known RBP	17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	RHD	Q02161	417 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	DPYS	Q14117	519 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	PDE1C	Q14123	709 aa	Predicted RBP	17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	ZNF542P	Q5EBM4	170 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	CDCP2	Q5VXM1	449 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	NPW	Q8N729	165 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	HIC2	Q96JB3	615 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	SUV39H2	Q9H5I1	410 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	DNAJC28	Q9NX36	388 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	NLGN3	Q9NZ94	848 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	CWC15	Q9P013	229 aa	Known RBP	17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	KLF15	Q9UIH9	416 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	PCDHB1	Q9Y5F3	818 aa		17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	BZW2	Q9Y6E2	419 aa	Known RBP	17.91	■□□□□ 0.46
MRPL28-203	ENST00000429738	LY6G6E	A0A0G2JKS1	128 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	BUB1B	O60566	1050 aa	Predicted RBP	17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	MMP20	O60882	483 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	TM7SF2	O76062	418 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	CKMT1A	P12532	417 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	IL1R2	P27930	398 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	IGFALS	P35858	605 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	CSNK1D	P48730	415 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	UCN	P55089	124 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	UBASH3A	P57075	661 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	EIF2B5	Q13144	721 aa	Known RBP	17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	DPYSL2	Q16555	572 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	TMEM52B	Q4KMG9	183 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	PPP6R3	Q5H9R7	873 aa	Predicted RBP	17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	BROX	Q5VW32	411 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	FAM181A	Q8N9Y4	354 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	TP53I13	Q8NBR0	393 aa	Predicted RBP	17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	ZNF548	Q8NEK5	533 aa	Predicted RBP	17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	NAF1	Q96HR8	494 aa	Known RBP	17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	ZNF641	Q96N77	438 aa	Predicted RBP	17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	TUBGCP5	Q96RT8	1024 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	MYO1A	Q9UBC5	1043 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738		U3KQA8	63 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	NAV2	Q8IVL1	2488 aa		17.9	■□□□□ 0.46
MRPL28-203	ENST00000429738	NEMP2	A6NFY4	417 aa		17.89	■□□□□ 0.45
MRPL28-203	ENST00000429738	TOR1B	O14657	336 aa		17.89	■□□□□ 0.45
MRPL28-203	ENST00000429738	FFAR2	O15552	330 aa		17.89	■□□□□ 0.45
MRPL28-203	ENST00000429738	DAPK3	O43293	454 aa		17.89	■□□□□ 0.45
MRPL28-203	ENST00000429738	OPA1	O60313	960 aa		17.89	■□□□□ 0.45
MRPL28-203	ENST00000429738	DXO	O77932	396 aa	Known RBP	17.89	■□□□□ 0.45

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms