RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 PLEKHG6Q3KR16 790 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 CACHD1Q5VU97 1274 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 PM20D1Q6GTS8 502 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 USP51Q70EK9 711 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 CREB3L2Q70SY1 520 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 PRSS48Q7RTY5 328 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 FAM124AQ86V42 546 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 ARRDC4Q8NCT1 418 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 PNMA1Q8ND90 353 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZFAND1Q8TCF1 268 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 KLHL6Q8WZ60 621 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 PROX1Q92786 737 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 GPKOWQ92917 476 aaPredicted RBP eCLIP8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 SLCO4A1Q96BD0 722 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 SGK3Q96BR1 496 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 B3GALT6Q96L58 329 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 RBM14Q96PK6 669 aaKnown RBP8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 KCTD14Q9BQ13 255 aaPredicted RBP8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 FGFBP2Q9BYJ0 223 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 DSN1Q9H410 356 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 IL37Q9NZH6 218 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 FARP1Q9Y4F1 1045 aaPredicted RBP8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 CCDC195A0A1B0GUA6 201 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 HMX3A6NHT5 357 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 C9IYK1 514 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 TOR1BO14657 336 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 TSPAN4O14817 238 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 SYNCRIPO60506 623 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 AVILO75366 819 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 SCO1O75880 301 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 GABARAPO95166 117 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 SEC24AO95486 1093 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 ASS1P00966 412 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 CALB1P05937 261 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 RALAP11233 206 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 IL7P13232 177 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 NPR3P17342 541 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 FGFR3P22607 806 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 ERP29P30040 261 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 RFC4P35249 363 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 CAPGP40121 348 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 GNPDA1P46926 289 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 SLC1A6P48664 564 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 PKNOX1P55347 436 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 DEFA1P59665 94 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 DEFA3P59666 94 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 UBXN2AP68543 259 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 FSTL1Q12841 308 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 GRM4Q14833 912 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 PPP1R3AQ16821 1122 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 KNOP1Q1ED39 458 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 KRT79Q5XKE5 535 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 GDPD3Q7L5L3 318 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 SLC26A11Q86WA9 606 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 LGI2Q8N0V4 545 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 KCT2Q8NC54 265 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 OR7A2PQ8NGA2 310 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 PBXIP1Q96AQ6 731 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 TESCQ96BS2 214 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 SPOCK3Q9BQ16 436 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 PPA2Q9H2U2 334 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 WDR41Q9HAD4 459 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 TOPORSQ9NS56 1045 aaPredicted RBP8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 IARS2Q9NSE4 1012 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 PAK1IP1Q9NWT1 392 aaPredicted RBP8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 CPNE7Q9UBL6 633 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 TRMT6Q9UJA5 497 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 MRPL11Q9Y3B7 192 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 SNX8Q9Y5X2 465 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 CNTNAP1P78357 1384 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 CYB561D2O14569 222 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 LIASO43766 372 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 TADA2AO75478 443 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZBTB7AO95365 584 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 ECDO95905 644 aaPredicted RBP8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 ACADMP11310 421 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 STMN1P16949 149 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 MSX2P35548 267 aaPredicted RBP8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 RAP1GAPP47736 663 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 ARHGDIAP52565 204 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 AP1S2P56377 157 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 SSTP61278 116 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 MGAT3Q09327 533 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 GALEQ14376 348 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 FAM209BQ5JX69 171 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 TMEM65Q6PI78 240 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 DPY19L3Q6ZPD9 716 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 ERMP1Q7Z2K6 904 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 PRSS42Q7Z5A4 293 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 ADCK1Q86TW2 530 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 TAGAPQ8N103 731 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 CPA6Q8N4T0 437 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 DHRSXQ8N5I4 330 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 FBXO36Q8NEA4 188 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 ST13P5Q8NFI4 369 aaPredicted RBP8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 TAS1R2Q8TE23 839 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 NCLNQ969V3 563 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 TBCBQ99426 244 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 SORT1Q99523 831 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 TTYH2Q9BSA4 534 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms