RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 SEMA5AQ13591 1074 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 PCID2Q5JVF3 399 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 CHST9Q7L1S5 443 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 WDR75Q8IWA0 830 aaKnown RBP11.09□□□□□ -0.63
HIPK2-203ENST00000428878 EFCAB3Q8N7B9 438 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 CENPIQ92674 756 aaPredicted RBP11.09□□□□□ -0.63
HIPK2-203ENST00000428878 CSNK1G1Q9HCP0 422 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 SNX15Q9NRS6 342 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 DUS2Q9NX74 493 aaKnown RBP11.09□□□□□ -0.63
HIPK2-203ENST00000428878 HEY2Q9UBP5 337 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 TRIM33Q9UPN9 1127 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 SMG5Q9UPR3 1016 aaKnown RBP11.09□□□□□ -0.63
HIPK2-203ENST00000428878 PFDN6O15212 129 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 MAFKO60675 156 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 BAG2O95816 211 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 CD72P21854 359 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 CDC25CP30307 473 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 CCR10P46092 362 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 ACOX1Q15067 660 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 TMEM240Q5SV17 173 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 ATG16L1Q676U5 607 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 MTDHQ86UE4 582 aaKnown RBP11.09□□□□□ -0.63
HIPK2-203ENST00000428878 ITFG1Q8TB96 612 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 ZNF75CPQ92670 426 aaPredicted RBP11.09□□□□□ -0.63
HIPK2-203ENST00000428878 SIGLEC10Q96LC7 697 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 OSGEPL1Q9H4B0 414 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.09□□□□□ -0.63
HIPK2-203ENST00000428878 GVINP1Q7Z2Y8 2422 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 A0A1W2PQ67 120 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 C2P06681 752 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 ESRRAP11474 423 aaPredicted RBP11.09□□□□□ -0.63
HIPK2-203ENST00000428878 CCNCP24863 283 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 CD70P32970 193 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 RBBP7Q16576 425 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 KIF19Q2TAC6 998 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 MMEL1Q495T6 779 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 VWA5B1Q5TIE3 1220 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 NADSYN1Q6IA69 706 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 MRNIPQ6NTE8 343 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 LRRC8BQ6P9F7 803 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 SPATA16Q9BXB7 569 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 ADGRE3Q9BY15 652 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 EPB41L4BQ9H329 900 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 SLC24A2Q9UI40 661 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 CDH23Q9H251 3354 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 HEATR9A2RTY3 570 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 CBX6O95503 412 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 COL6A1P12109 1028 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 TYRP14679 529 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 CPA3P15088 417 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 PIK3CGP48736 1102 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 TCEAL1Q15170 157 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 RAB41Q5JT25 222 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 RBM20Q5T481 1227 aaKnown RBP11.09□□□□□ -0.63
HIPK2-203ENST00000428878 FSTL4Q6MZW2 842 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 CES5AQ6NT32 575 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 RFWD2Q8NHY2 731 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 WFDC5Q8TCV5 224 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 SCG3Q8WXD2 468 aaKnown RBP11.09□□□□□ -0.63
HIPK2-203ENST00000428878 DCUN1D1Q96GG9 259 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.09□□□□□ -0.63
HIPK2-203ENST00000428878 CLIC5Q9NZA1 410 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 HAO1Q9UJM8 370 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 USP15Q9Y4E8 981 aaPredicted RBP11.09□□□□□ -0.63
HIPK2-203ENST00000428878 USP3Q9Y6I4 520 aa11.09□□□□□ -0.63
HIPK2-203ENST00000428878 TTC28Q96AY4 2481 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 C9JVG2 144 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 SERPINB3P29508 390 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 MC4RP32245 332 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 WDR4P57081 412 aaKnown RBP11.08□□□□□ -0.64
HIPK2-203ENST00000428878 DSG1Q02413 1049 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 GALNT2Q10471 571 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 TPGS2Q68CL5 300 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 DRICH1Q6PGQ1 229 aaPredicted RBP11.08□□□□□ -0.64
HIPK2-203ENST00000428878 CDHR3Q6ZTQ4 885 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 SNX19Q92543 992 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 NXNL1Q96CM4 212 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 SGSM3Q96HU1 749 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 CDK5RAP1Q96SZ6 601 aaKnown RBP11.08□□□□□ -0.64
HIPK2-203ENST00000428878 OSBPL2Q9H1P3 480 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 TMEM216Q9P0N5 145 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 VPS51Q9UID3 782 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 EFCAB14O75071 495 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 SPAG6O75602 509 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 EPHX1P07099 455 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 FOXN2P32314 431 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 MAGEA10P43363 369 aaPredicted RBP11.08□□□□□ -0.64
HIPK2-203ENST00000428878 BST1Q10588 318 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 PAFAH1B3Q15102 231 aaKnown RBP11.08□□□□□ -0.64
HIPK2-203ENST00000428878 SIRPB2Q5JXA9 342 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 C10orf107Q8IVU9 208 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 RNF148Q8N7C7 305 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 VAT1Q99536 393 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 SH3GL2Q99962 352 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 RCOR3Q9P2K3 495 aaPredicted RBP11.08□□□□□ -0.64
HIPK2-203ENST00000428878 TEX264Q9Y6I9 313 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 CABIN1Q9Y6J0 2220 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 OR2AG2A6NM03 316 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 UBOX5O94941 541 aa11.08□□□□□ -0.64
HIPK2-203ENST00000428878 RALBP11234 206 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms