RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 GPR158Q5T848 1215 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 OTUD1Q5VV17 481 aaPredicted RBP11.55□□□□□ -0.56
CECR3-201ENST00000428828 GPR153Q6NV75 609 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 SCYL2Q6P3W7 929 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 FBXL19Q6PCT2 694 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 GET4Q7L5D6 327 aaPredicted RBP11.55□□□□□ -0.56
CECR3-201ENST00000428828 GPR149Q86SP6 731 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 LZTR1Q8N653 840 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 ARL14EPQ8N8R7 260 aaPredicted RBP11.55□□□□□ -0.56
CECR3-201ENST00000428828 CCDC89Q8N998 374 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 ITFG1Q8TB96 612 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 CHPT1Q8WUD6 406 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 SREK1Q8WXA9 508 aaKnown RBP11.55□□□□□ -0.56
CECR3-201ENST00000428828 KRT35Q92764 455 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 PABPC5Q96DU9 382 aaKnown RBP11.55□□□□□ -0.56
CECR3-201ENST00000428828 SLC22A12Q96S37 553 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 CNPY3Q9BT09 278 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 TSSK1BQ9BXA7 367 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 MRPL1Q9BYD6 325 aaKnown RBP11.55□□□□□ -0.56
CECR3-201ENST00000428828 GBA3Q9H227 469 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 SMPD4Q9NXE4 827 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 GIN1Q9NXP7 522 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 DCTN4Q9UJW0 460 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 CDH7Q9ULB5 785 aa11.55□□□□□ -0.56
CECR3-201ENST00000428828 MRPS23Q9Y3D9 190 aaKnown RBP11.55□□□□□ -0.56
CECR3-201ENST00000428828 DPYSL4O14531 572 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 PROSCO94903 275 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 CKMP06732 381 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 C8BP07358 591 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 DHRS4L1P0CG22 281 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 IRF1P10914 325 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 MBL2P11226 248 aaPredicted RBP11.54□□□□□ -0.56
CECR3-201ENST00000428828 TCF4P15884 667 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 COMTP21964 271 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 PRDX6P30041 224 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 ATP5C1P36542 298 aaKnown RBP11.54□□□□□ -0.56
CECR3-201ENST00000428828 MAGEA4P43358 317 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 PTPN9P43378 593 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 PPP3CCP48454 512 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 EPHA5P54756 1037 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 PIGHQ14442 188 aaPredicted RBP11.54□□□□□ -0.56
CECR3-201ENST00000428828 CBX2Q14781 532 aaPredicted RBP11.54□□□□□ -0.56
CECR3-201ENST00000428828 PRKD1Q15139 912 aaPredicted RBP11.54□□□□□ -0.56
CECR3-201ENST00000428828 TLR1Q15399 786 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 ARHGAP15Q53QZ3 475 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 CES5AQ6NT32 575 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 DCDC5Q6ZRR9 648 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 ARCQ7LC44 396 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 FAM131BQ86XD5 332 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 CMASQ8NFW8 434 aaPredicted RBP11.54□□□□□ -0.56
CECR3-201ENST00000428828 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.54□□□□□ -0.56
CECR3-201ENST00000428828 FNIP1Q8TF40 1166 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 RNF34Q969K3 372 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 LRGUKQ96M69 825 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 NPY6RQ99463 290 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 RNF38Q9H0F5 515 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 SMG9Q9H0W8 520 aaKnown RBP11.54□□□□□ -0.56
CECR3-201ENST00000428828 SMOC2Q9H3U7 446 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 OLA1Q9NTK5 396 aaKnown RBP11.54□□□□□ -0.56
CECR3-201ENST00000428828 PIGVQ9NUD9 493 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 MTMR10Q9NXD2 777 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 SELENONQ9NZV5 590 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 MARCH2Q9P0N8 246 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 PSMC3IPQ9P2W1 217 aaPredicted RBP11.54□□□□□ -0.56
CECR3-201ENST00000428828 PCSK1NQ9UHG2 260 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 TSC22D4Q9Y3Q8 395 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 SLC12A8A0AV02 714 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 H3BRJ5 948 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 DNAJA2O60884 412 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 MOSPD3O75425 235 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 LRCH4O75427 683 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 USP1O94782 785 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 FGF19O95750 216 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 CAPNS1P04632 268 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 POU2F2P09086 479 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 HOXB8P17481 243 aaPredicted RBP11.54□□□□□ -0.56
CECR3-201ENST00000428828 KRT15P19012 456 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 POLR2EP19388 210 aaKnown RBP11.54□□□□□ -0.56
CECR3-201ENST00000428828 KCNA5P22460 613 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 FSHRP23945 695 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 NFKBIAP25963 317 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 HMOX2P30519 316 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 KCTD19Q17RG1 926 aaPredicted RBP11.54□□□□□ -0.56
CECR3-201ENST00000428828 PRSS36Q5K4E3 855 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 RNF111Q6ZNA4 994 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.54□□□□□ -0.56
CECR3-201ENST00000428828 LEMD2Q8NC56 503 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 ACSF2Q96CM8 615 aaPredicted RBP11.54□□□□□ -0.56
CECR3-201ENST00000428828 GRIP2Q9C0E4 1043 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 CCDC68Q9H2F9 335 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 MRPL46Q9H2W6 279 aaKnown RBP11.54□□□□□ -0.56
CECR3-201ENST00000428828 TPK1Q9H3S4 243 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 VPS45Q9NRW7 570 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 DKK3Q9UBP4 350 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 ADAMTS6Q9UKP5 1117 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 SOX13Q9UN79 622 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 MAD1L1Q9Y6D9 718 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 CLUHO75153 1309 aa11.54□□□□□ -0.56
CECR3-201ENST00000428828 ZNF197O14709 1029 aa11.53□□□□□ -0.56
CECR3-201ENST00000428828 SCAMP3O14828 347 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms