RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 CSRP1P21291 193 aaKnown RBP10.34□□□□□ -0.75
HDLBP-216ENST00000428482 SDHBP21912 280 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 HTR7P34969 479 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 MMP12P39900 470 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 NOP2P46087 812 aaKnown RBP10.34□□□□□ -0.75
HDLBP-216ENST00000428482 NDST2P52849 883 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 C21orf59P57076 290 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 YBEYP58557 167 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-216ENST00000428482 TRAF2Q12933 501 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 BNIP3Q12983 259 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 DNAJC3Q13217 504 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 PIGHQ14442 188 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-216ENST00000428482 IRF4Q15306 451 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 MYLK3Q32MK0 819 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 SETMARQ53H47 684 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-216ENST00000428482 ZNF805Q5CZA5 627 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 ZNF542PQ5EBM4 170 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 TMCO4Q5TGY1 634 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 TMCO3Q6UWJ1 677 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 GDPD4Q6W3E5 623 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 KANSL1Q7Z3B3 1105 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 RBFAQ8N0V3 343 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.34□□□□□ -0.75
HDLBP-216ENST00000428482 FAM71BQ8TC56 605 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 RFFLQ8WZ73 363 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 FAF2Q96CS3 445 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 KLF6Q99612 283 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-216ENST00000428482 CALN1Q9BXU9 219 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 TCEAL2Q9H3H9 227 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-216ENST00000428482 PCDH12Q9NPG4 1184 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 GPR27Q9NS67 375 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 UCKL1Q9NWZ5 548 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 IPO11Q9UI26 975 aaKnown RBP10.34□□□□□ -0.75
HDLBP-216ENST00000428482 HPCAL4Q9UM19 191 aa10.34□□□□□ -0.75
HDLBP-216ENST00000428482 ZSCAN5CA6NGD5 496 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 UPK3BL1B0FP48 263 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 UPK3BL2E5RIL1 263 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 MAFKO60675 156 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 MMP20O60882 483 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 PALMO75781 387 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 HLA-DQB2P05538 268 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 CELA2BP08218 269 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 C6P13671 934 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 TIMP2P16035 220 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 HNRNPA2B1P22626 353 aaKnown RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 MAN1A1P33908 653 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 ARL4AP40617 200 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 GEMIN4P57678 1058 aaKnown RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 SLC10A2Q12908 348 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 ZBTB17Q13105 803 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 LBRQ14739 615 aaKnown RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 TEAD4Q15561 434 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 IFI16Q16666 785 aaKnown RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 FBXL19Q6PCT2 694 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 KYAT3Q6YP21 454 aaKnown RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 KIAA1328Q86T90 577 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 SLCO6A1Q86UG4 719 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 PSTKQ8IV42 348 aaKnown RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 TP53I13Q8NBR0 393 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 SLC35G2Q8TBE7 412 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 SETD7Q8WTS6 366 aaKnown RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 ELF4Q99607 663 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 MGME1Q9BQP7 344 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 ZNF670Q9BS34 389 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 HERPUD2Q9BSE4 406 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 DESI2Q9BSY9 194 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 TMEM121BQ9BXQ6 578 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 ZDHHC5Q9C0B5 715 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 LACRTQ9GZZ8 138 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 MBNL1Q9NR56 388 aaKnown RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 TMEM51Q9NW97 253 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 TRMT1Q9NXH9 659 aaKnown RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 UVRAGQ9P2Y5 699 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 TRIM10Q9UDY6 481 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 FARP1Q9Y4F1 1045 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 ZFC3H1O60293 1989 aaKnown RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 TPRP12270 2363 aaKnown RBP10.33□□□□□ -0.76
HDLBP-216ENST00000428482 BSNQ9UPA5 3926 aa10.33□□□□□ -0.76
HDLBP-216ENST00000428482 LRRD1A4D1F6 860 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 A8MX80 341 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 C1QTNF9BB2RNN3 333 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 MYO1FO00160 1098 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 TLR4O00206 839 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 TRAFD1O14545 582 aaPredicted RBP10.32□□□□□ -0.76
HDLBP-216ENST00000428482 FFAR2O15552 330 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 AP1G1O43747 822 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 NEBLO76041 1014 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 PCCBP05166 539 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 ATXN1LP0C7T5 689 aaKnown RBP10.32□□□□□ -0.76
HDLBP-216ENST00000428482 C1QTNF9P0C862 333 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 PECAM1P16284 738 aaPredicted RBP10.32□□□□□ -0.76
HDLBP-216ENST00000428482 CR2P20023 1033 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 LHCGRP22888 699 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 DYNLT1P63172 113 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 DSC2Q02487 901 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 IL10RBQ08334 325 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 SLC20A2Q08357 652 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 ADCY2Q08462 1091 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 GALNT2Q10471 571 aa10.32□□□□□ -0.76
HDLBP-216ENST00000428482 TUBB2AQ13885 445 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms