RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 KLHL11Q9NVR0 708 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMC1A-203ENST00000428014 A0A1B0GVT2 93 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 A0A1W2PQU0 124 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 A6NNZ2 444 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 GOLGA6L6A8MZA4 724 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 J3KR12 359 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 KRIT1O00522 736 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 MATN3O15232 486 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 NDUFA10O95299 355 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 CA4P22748 312 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 KDELR1P24390 212 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 MAOBP27338 520 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 PTPN7P35236 360 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 MAGEA1P43355 309 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 CSNK1EP49674 416 aaKnown RBP9.23□□□□□ -0.93
SMC1A-203ENST00000428014 GSDMDP57764 484 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 PPP2CBP62714 309 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 PPP2CAP67775 309 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 TFDP2Q14188 446 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 PTK2BQ14289 1009 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 KRT81Q14533 505 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 CCDC6Q16204 474 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 PPP2R5EQ16537 467 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 ANKRD20A8PQ5CZ79 823 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 KCNT1Q5JUK3 1230 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 MARC1Q5VT66 337 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 NCBP2-AS2Q69YL0 99 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 ERAP2Q6P179 960 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 ADAT2Q7Z6V5 191 aaKnown RBP9.23□□□□□ -0.93
SMC1A-203ENST00000428014 SRLQ86TD4 932 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 LAPTM4BQ86VI4 370 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 PARP9Q8IXQ6 854 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 NDUFAF2Q8N183 169 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 ATPAF2Q8N5M1 289 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 KCTD6Q8NC69 237 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 PCDH19Q8TAB3 1148 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 GRIN3AQ8TCU5 1115 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 CENPTQ96BT3 561 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 ZNF830Q96NB3 372 aaPredicted RBP9.23□□□□□ -0.93
SMC1A-203ENST00000428014 MCCC1Q96RQ3 725 aaPredicted RBP9.23□□□□□ -0.93
SMC1A-203ENST00000428014 LYSMD1Q96S90 227 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 SRPK1Q96SB4 655 aaKnown RBP9.23□□□□□ -0.93
SMC1A-203ENST00000428014 VAT1Q99536 393 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 KLF6Q99612 283 aaPredicted RBP9.23□□□□□ -0.93
SMC1A-203ENST00000428014 CINPQ9BW66 212 aaPredicted RBP9.23□□□□□ -0.93
SMC1A-203ENST00000428014 REPIN1Q9BWE0 567 aaKnown RBP9.23□□□□□ -0.93
SMC1A-203ENST00000428014 TM6SF2Q9BZW4 377 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 POLR1EQ9GZS1 481 aaKnown RBP9.23□□□□□ -0.93
SMC1A-203ENST00000428014 MIR1-1HGQ9H1L0 117 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 SMOC1Q9H4F8 434 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 ZDHHC6Q9H6R6 413 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 GPATCH2LQ9NWQ4 482 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 NCKIPSDQ9NZQ3 722 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 PCOLCE2Q9UKZ9 415 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 EPN1Q9Y6I3 576 aaPredicted RBP9.23□□□□□ -0.93
SMC1A-203ENST00000428014 CSNK1G3Q9Y6M4 447 aa9.23□□□□□ -0.93
SMC1A-203ENST00000428014 ATXN2Q99700 1313 aaKnown RBP9.23□□□□□ -0.93
SMC1A-203ENST00000428014 CEP295Q9C0D2 2601 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 SPTY2D1-AS1A0A0U1RR47 76 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 C3orf70A6NLC5 250 aaPredicted RBP9.22□□□□□ -0.93
SMC1A-203ENST00000428014 TPP1O14773 563 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 TM7SF2O76062 418 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 UGT2B4P06133 528 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 PYGLP06737 847 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 TCF4P15884 667 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 TIMP2P16035 220 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 ZNF30P17039 623 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 AMPD1P23109 780 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 MMP12P39900 470 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 NOVA1P51513 510 aaKnown RBP9.22□□□□□ -0.93
SMC1A-203ENST00000428014 METAP1P53582 386 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 PFN3P60673 137 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 IFI35P80217 286 aaPredicted RBP9.22□□□□□ -0.93
SMC1A-203ENST00000428014 BCL2L1Q07817 233 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 PPIDQ08752 370 aaKnown RBP9.22□□□□□ -0.93
SMC1A-203ENST00000428014 SGCGQ13326 291 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 ZNF235Q14590 738 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 PDK1Q15118 436 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 SMTNL2Q2TAL5 461 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 TXNRD3NBQ6F5E7 133 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 ZNF662Q6ZS27 426 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 TTC7BQ86TV6 843 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 ZNF354CQ86Y25 554 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 CACUL1Q86Y37 369 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 NAXDQ8IW45 347 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 KATNAL2Q8IYT4 538 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 CBARPQ8N350 705 aaPredicted RBP9.22□□□□□ -0.93
SMC1A-203ENST00000428014 TSEN2Q8NCE0 465 aaKnown RBP9.22□□□□□ -0.93
SMC1A-203ENST00000428014 ATL2Q8NHH9 583 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 SAP25Q8TEE9 199 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 BTN2A2Q8WVV5 523 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 SNX19Q92543 992 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 HSPH1Q92598 858 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 KLHDC7BQ96G42 594 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 SLC6A18Q96N87 628 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 KLHL32Q96NJ5 620 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 OLFM3Q96PB7 478 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 C19orf43Q9BQ61 176 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 PACSIN1Q9BY11 444 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms