RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 THOP1P52888 689 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 PFN3P60673 137 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 POLR2LP62875 67 aaKnown RBP15.31■□□□□ 0.04
PHF1-204ENST00000427826 E2F1Q01094 437 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 PDE1CQ14123 709 aaPredicted RBP15.31■□□□□ 0.04
PHF1-204ENST00000427826 FZD2Q14332 565 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 HADHQ16836 314 aaKnown RBP15.31■□□□□ 0.04
PHF1-204ENST00000427826 TSR1Q2NL82 804 aaKnown RBP15.31■□□□□ 0.04
PHF1-204ENST00000427826 SMTNL2Q2TAL5 461 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 PROX2Q3B8N5 592 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 BBS5Q8N3I7 341 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 NPWQ8N729 165 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 PDCD7Q8N8D1 485 aaKnown RBP15.31■□□□□ 0.04
PHF1-204ENST00000427826 BTN2A2Q8WVV5 523 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 PSKH2Q96QS6 385 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 USP29Q9HBJ7 922 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 ZNHIT6Q9NWK9 470 aaKnown RBP15.31■□□□□ 0.04
PHF1-204ENST00000427826 UCKL1Q9NWZ5 548 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 NLGN3Q9NZ94 848 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 SEPT3Q9UH03 358 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 LCMT1Q9UIC8 334 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 CSNK1G3Q9Y6M4 447 aa15.31■□□□□ 0.04
PHF1-204ENST00000427826 CFAP69A5D8W1 941 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 SRRM3A6NNA2 597 aaPredicted RBP15.3■□□□□ 0.04
PHF1-204ENST00000427826 TMEM110-MUSTN1A8MSY1 372 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 BUB1BO60566 1050 aaPredicted RBP15.3■□□□□ 0.04
PHF1-204ENST00000427826 CAPNS1P04632 268 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 RARAP10276 462 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 NME1P15531 152 aaKnown RBP15.3■□□□□ 0.04
PHF1-204ENST00000427826 HSPA9P38646 679 aaKnown RBP15.3■□□□□ 0.04
PHF1-204ENST00000427826 AP1S1P61966 158 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 DAB2P98082 770 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 BCL2L1Q07817 233 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 KRT81Q14533 505 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 LBRQ14739 615 aaKnown RBP15.3■□□□□ 0.04
PHF1-204ENST00000427826 LRRC73Q5JTD7 316 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 SPECC1LQ69YQ0 1117 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 PROSER1Q86XN7 944 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 CAMK1DQ8IU85 385 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 LRRC49Q8IUZ0 686 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 PAF1Q8N7H5 531 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 OR8K1Q8NGG5 319 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 NSMCE1Q8WV22 266 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 CSPG4P5Q96PW8 444 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 WRAP53Q9BUR4 548 aaKnown RBP15.3■□□□□ 0.04
PHF1-204ENST00000427826 PCDH12Q9NPG4 1184 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 NCKIPSDQ9NZQ3 722 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 RCOR3Q9P2K3 495 aaPredicted RBP15.3■□□□□ 0.04
PHF1-204ENST00000427826 UVRAGQ9P2Y5 699 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 DKK4Q9UBT3 224 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 ATP8A1Q9Y2Q0 1164 aa15.3■□□□□ 0.04
PHF1-204ENST00000427826 WDFY3Q8IZQ1 3526 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.29■□□□□ 0.04
PHF1-204ENST00000427826 A0A1W2PQ67 120 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 FFAR2O15552 330 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 H2AFZP0C0S5 128 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 CKMT1AP12532 417 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 JUNDP17535 347 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 ITIH2P19823 946 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 AMPD1P23109 780 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 SSR1P43307 286 aaKnown RBP15.29■□□□□ 0.04
PHF1-204ENST00000427826 PEX5P50542 639 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 SCNN1BP51168 640 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 DUSP3P51452 185 aaPredicted RBP15.29■□□□□ 0.04
PHF1-204ENST00000427826 ZNF235Q14590 738 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 LRRC14Q15048 493 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 ZNF542PQ5EBM4 170 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 ARHGAP36Q6ZRI8 547 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 H2AFVQ71UI9 128 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 CACTIN-AS1Q8N1I8 211 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 FAM181AQ8N9Y4 354 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 ZNF564Q8TBZ8 553 aaPredicted RBP15.29■□□□□ 0.04
PHF1-204ENST00000427826 CTNNBL1Q8WYA6 563 aaPredicted RBP15.29■□□□□ 0.04
PHF1-204ENST00000427826 BTBD6Q96KE9 485 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 DEF6Q9H4E7 631 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 PCDH18Q9HCL0 1135 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 DOCK9Q9BZ29 2069 aa15.29■□□□□ 0.04
PHF1-204ENST00000427826 TP53BP1Q12888 1972 aaPredicted RBP15.29■□□□□ 0.04
PHF1-204ENST00000427826 FAM149AA5PLN7 773 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 TRABD2BA6NFA1 517 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 AQP9O43315 295 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 LZTS3O60299 673 aaPredicted RBP15.28■□□□□ 0.04
PHF1-204ENST00000427826 TCF4P15884 667 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 NFKBIAP25963 317 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 EIF4A3P38919 411 aaKnown RBP15.28■□□□□ 0.04
PHF1-204ENST00000427826 MMP12P39900 470 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 RGRP47804 291 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 LIG3P49916 1009 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 CDH6P55285 790 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 SLC25A11Q02978 314 aaKnown RBP15.28■□□□□ 0.04
PHF1-204ENST00000427826 CAMK2BQ13554 666 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 AGERQ15109 404 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 SLC18A3Q16572 532 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 ATPAF2Q8N5M1 289 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 TP53I13Q8NBR0 393 aaPredicted RBP15.28■□□□□ 0.04
PHF1-204ENST00000427826 ZNF548Q8NEK5 533 aaPredicted RBP15.28■□□□□ 0.04
PHF1-204ENST00000427826 RFFLQ8WZ73 363 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 ECHDC3Q96DC8 303 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 TBATAQ96M53 351 aa15.28■□□□□ 0.04
PHF1-204ENST00000427826 DNAJC7Q99615 494 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms