RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 KRT17Q04695 432 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 ZNF91Q05481 1191 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 FOXO1Q12778 655 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 ERV3-1Q14264 604 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 SPARCL1Q14515 664 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 KRT31Q15323 416 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 SEC23BQ15437 767 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 MAPKAPK3Q16644 382 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 ZSCAN26Q16670 478 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 PFKFB3Q16875 520 aaPredicted RBP5.33□□□□□ -1.56
LINC00458-202ENST00000427299 PFKFB4Q16877 469 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 ZACNQ401N2 412 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 AWAT1Q58HT5 328 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 TCP11X2Q5H9J9 407 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 ZNF569Q5MCW4 686 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 MANEALQ5VSG8 457 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 USP49Q70CQ1 688 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 KIAA1328Q86T90 577 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 ANKRD18AQ8IVF6 992 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 CCDC170Q8IYT3 715 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 MYCT1Q8N699 235 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 NELFBQ8WX92 580 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 PIGBQ92521 554 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 PPP2R3CQ969Q6 453 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 PAGE5Q96GU1 130 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 LZTS2Q9BRK4 669 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 DESI2Q9BSY9 194 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 PARD6BQ9BYG5 372 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 RAB34Q9BZG1 259 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 MYLK2Q9H1R3 596 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 MRPL44Q9H9J2 332 aaKnown RBP5.33□□□□□ -1.56
LINC00458-202ENST00000427299 LZTFL1Q9NQ48 299 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 SAMSN1Q9NSI8 373 aaKnown RBP5.33□□□□□ -1.56
LINC00458-202ENST00000427299 ATP8A2Q9NTI2 1148 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 POT1Q9NUX5 634 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 EXOC1Q9NV70 894 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 TMEM184CQ9NVA4 438 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 VPS54Q9P1Q0 977 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 HEY2Q9UBP5 337 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 RGPD3A6NKT7 1758 aaPredicted RBP5.33□□□□□ -1.56
LINC00458-202ENST00000427299 RGPD4Q7Z3J3 1758 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 ATXN2Q99700 1313 aaKnown RBP5.32□□□□□ -1.56
LINC00458-202ENST00000427299 TSPY2A6NKD2 308 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 SYT5O00445 386 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 PODXLO00592 558 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 CD3EAPO15446 510 aaKnown RBP5.32□□□□□ -1.56
LINC00458-202ENST00000427299 SMAD6O43541 496 aaKnown RBP5.32□□□□□ -1.56
LINC00458-202ENST00000427299 SKAP2O75563 359 aaPredicted RBP5.32□□□□□ -1.56
LINC00458-202ENST00000427299 RPS6KA5O75582 802 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 RNF8O76064 485 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 SEC31AO94979 1220 aaKnown RBP5.32□□□□□ -1.56
LINC00458-202ENST00000427299 NTSR2O95665 410 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 AGR2O95994 175 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 RPN1P04843 607 aaKnown RBP5.32□□□□□ -1.56
LINC00458-202ENST00000427299 PSG1P11464 419 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 HSD3B1P14060 373 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 TRIM21P19474 475 aaKnown RBP5.32□□□□□ -1.56
LINC00458-202ENST00000427299 SLC5A2P31639 672 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 CASP14P31944 242 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 KRT9P35527 623 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 ACTN2P35609 894 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 SERPINF1P36955 418 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 LMAN1P49257 510 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 AARSP49588 968 aaKnown RBP eCLIP5.32□□□□□ -1.56
LINC00458-202ENST00000427299 GEMIN4P57678 1058 aaKnown RBP5.32□□□□□ -1.56
LINC00458-202ENST00000427299 UBXN1Q04323 297 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 CHRNDQ07001 517 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 LMAN2Q12907 356 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 FHL3Q13643 280 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 BLMHQ13867 455 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 HLFQ16534 295 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 SLC5A9Q2M3M2 681 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 CCDC38Q502W7 563 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 TMTC4Q5T4D3 741 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 RAP1GAP2Q684P5 730 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 CRTC1Q6UUV9 634 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 GBP6Q6ZN66 633 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 APTXQ7Z2E3 356 aaKnown RBP5.32□□□□□ -1.56
LINC00458-202ENST00000427299 SLC35F6Q8N357 371 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 LINC01465Q8N7H1 131 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 TRIM58Q8NG06 486 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 AFAP1L1Q8TED9 768 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 IGFBPL1Q8WX77 278 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 JAKMIP2Q96AA8 810 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 ZDHHC12Q96GR4 267 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 DHTKD1Q96HY7 919 aaPredicted RBP5.32□□□□□ -1.56
LINC00458-202ENST00000427299 TBATAQ96M53 351 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 RUFY1Q96T51 708 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 RMDN3Q96TC7 470 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 C17orf80Q9BSJ5 609 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 CRACR2AQ9BSW2 395 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 PAGR1Q9BTK6 254 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 FUT8Q9BYC5 575 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 NYXQ9GZU5 481 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 ANKRD2Q9GZV1 360 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 KAT14Q9H8E8 782 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 ZBTB26Q9HCK0 441 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 OBP2BQ9NPH6 170 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 TCP11L1Q9NUJ3 509 aa5.32□□□□□ -1.56
LINC00458-202ENST00000427299 VPS51Q9UID3 782 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms