RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 UPK3BL1B0FP48 263 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 UPK3BL2E5RIL1 263 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 PGRMC1O00264 195 aaKnown RBP24.67■■□□□ 1.54
VEGFA-209ENST00000425836 AREL1O15033 823 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 SPINT1O43278 529 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 AP1G1O43747 822 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 STK10O94804 968 aaKnown RBP24.67■■□□□ 1.54
VEGFA-209ENST00000425836 ITIH2P19823 946 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 NFKB1P19838 968 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 DHPSP49366 369 aaPredicted RBP24.67■■□□□ 1.54
VEGFA-209ENST00000425836 GDF10P55107 478 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 ANKRD20A2Q5SQ80 823 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 ANKRD20A1Q5TYW2 823 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 ANKRD20A3Q5VUR7 823 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 DRICH1Q6PGQ1 229 aaPredicted RBP24.67■■□□□ 1.54
VEGFA-209ENST00000425836 NYAP1Q6ZVC0 841 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 PRELID2Q8N945 189 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 SPATA22Q8NHS9 363 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 CCDC110Q8TBZ0 833 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 PDCD6IPQ8WUM4 868 aaKnown RBP24.67■■□□□ 1.54
VEGFA-209ENST00000425836 FOXJ1Q92949 421 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 HSPA12BQ96MM6 686 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 TDRD1Q9BXT4 1180 aaKnown RBP24.67■■□□□ 1.54
VEGFA-209ENST00000425836 PREBQ9HCU5 417 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 A0A1W2PQ67 120 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 CFAP69A5D8W1 941 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 PRR23AA6NEV1 266 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 C5orf60A6NFR6 353 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 FZD6O60353 706 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 PGLSO95336 258 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 LMNAP02545 664 aaKnown RBP24.67■■□□□ 1.54
VEGFA-209ENST00000425836 PDHA1P08559 390 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 XPAP23025 273 aaPredicted RBP24.67■■□□□ 1.54
VEGFA-209ENST00000425836 SUOXP51687 545 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 ARMC12Q5T9G4 340 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 KIAA0895LQ68EN5 471 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 PAF1Q8N7H5 531 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 SPATA13Q96N96 652 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 FCRL5Q96RD9 977 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 NAP1L3Q99457 506 aaPredicted RBP24.67■■□□□ 1.54
VEGFA-209ENST00000425836 PCDH12Q9NPG4 1184 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 ZNF148Q9UQR1 794 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 ITM2BQ9Y287 266 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 SAR1BQ9Y6B6 198 aa24.67■■□□□ 1.54
VEGFA-209ENST00000425836 FANCMQ8IYD8 2048 aa24.66■■□□□ 1.54
VEGFA-209ENST00000425836 FSBPO95073 299 aa24.66■■□□□ 1.54
VEGFA-209ENST00000425836 MT-CYBP00156 380 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-209ENST00000425836 PRLP01236 227 aa24.66■■□□□ 1.54
VEGFA-209ENST00000425836 PRKCGP05129 697 aa24.66■■□□□ 1.54
VEGFA-209ENST00000425836 STIP1P31948 543 aaKnown RBP24.66■■□□□ 1.54
VEGFA-209ENST00000425836 PPP2CBP62714 309 aa24.66■■□□□ 1.54
VEGFA-209ENST00000425836 POLR2LP62875 67 aaKnown RBP24.66■■□□□ 1.54
VEGFA-209ENST00000425836 PPP2CAP67775 309 aa24.66■■□□□ 1.54
VEGFA-209ENST00000425836 SYT10Q6XYQ8 523 aa24.66■■□□□ 1.54
VEGFA-209ENST00000425836 BIRC7Q96CA5 298 aa24.66■■□□□ 1.54
VEGFA-209ENST00000425836 LOXL4Q96JB6 756 aa24.66■■□□□ 1.54
VEGFA-209ENST00000425836 AP1M1Q9BXS5 423 aa24.66■■□□□ 1.54
VEGFA-209ENST00000425836 HOMER3Q9NSC5 361 aa24.66■■□□□ 1.54
VEGFA-209ENST00000425836 RSPH14Q9UHP6 348 aa24.66■■□□□ 1.54
VEGFA-209ENST00000425836 GGT7Q9UJ14 662 aa24.66■■□□□ 1.54
VEGFA-209ENST00000425836 CHKBQ9Y259 395 aa24.66■■□□□ 1.54
VEGFA-209ENST00000425836 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-209ENST00000425836 F5H423 210 aaPredicted RBP24.65■■□□□ 1.54
VEGFA-209ENST00000425836 PCDH8O95206 1070 aa24.65■■□□□ 1.54
VEGFA-209ENST00000425836 CPP00450 1065 aa24.65■■□□□ 1.54
VEGFA-209ENST00000425836 IGHV4-34P06331 123 aa24.65■■□□□ 1.54
VEGFA-209ENST00000425836 ITGAVP06756 1048 aa24.65■■□□□ 1.54
VEGFA-209ENST00000425836 CASQ1P31415 396 aa24.65■■□□□ 1.54
VEGFA-209ENST00000425836 SLC14A2Q15849 920 aa24.65■■□□□ 1.54
VEGFA-209ENST00000425836 LYSMD4Q5XG99 296 aa24.65■■□□□ 1.54
VEGFA-209ENST00000425836 LAIR1Q6GTX8 287 aa24.65■■□□□ 1.54
VEGFA-209ENST00000425836 NEK5Q6P3R8 708 aa24.65■■□□□ 1.54
VEGFA-209ENST00000425836 PIH1D2Q8WWB5 315 aa24.65■■□□□ 1.54
VEGFA-209ENST00000425836 RTP4Q96DX8 246 aa24.65■■□□□ 1.54
VEGFA-209ENST00000425836 GBA3Q9H227 469 aa24.65■■□□□ 1.54
VEGFA-209ENST00000425836 UBP1Q9NZI7 540 aa24.65■■□□□ 1.54
VEGFA-209ENST00000425836 DRG1Q9Y295 367 aaKnown RBP24.65■■□□□ 1.54
VEGFA-209ENST00000425836 PLXND1Q9Y4D7 1925 aa24.65■■□□□ 1.54
VEGFA-209ENST00000425836 RIOK3O14730 519 aaKnown RBP24.64■■□□□ 1.54
VEGFA-209ENST00000425836 TSPAN6O43657 245 aa24.64■■□□□ 1.54
VEGFA-209ENST00000425836 OPHN1O60890 802 aa24.64■■□□□ 1.54
VEGFA-209ENST00000425836 RNGTTO60942 597 aaKnown RBP24.64■■□□□ 1.54
VEGFA-209ENST00000425836 GCATO75600 419 aa24.64■■□□□ 1.54
VEGFA-209ENST00000425836 CCR5P51681 352 aa24.64■■□□□ 1.54
VEGFA-209ENST00000425836 ITPRIPL1Q6GPH6 555 aa24.64■■□□□ 1.54
VEGFA-209ENST00000425836 PCDH9Q9HC56 1237 aa24.64■■□□□ 1.54
VEGFA-209ENST00000425836 FAM153AQ9UHL3 310 aa24.64■■□□□ 1.54
VEGFA-209ENST00000425836 PHTF1Q9UMS5 762 aa24.64■■□□□ 1.54
VEGFA-209ENST00000425836 MEI4A8MW99 385 aa24.63■■□□□ 1.53
VEGFA-209ENST00000425836 NEMP1O14524 444 aa24.63■■□□□ 1.53
VEGFA-209ENST00000425836 CA4P22748 312 aa24.63■■□□□ 1.53
VEGFA-209ENST00000425836 ITPKAP23677 461 aa24.63■■□□□ 1.53
VEGFA-209ENST00000425836 MAOBP27338 520 aa24.63■■□□□ 1.53
VEGFA-209ENST00000425836 ERAP2Q6P179 960 aa24.63■■□□□ 1.53
VEGFA-209ENST00000425836 USP34Q70CQ2 3546 aa24.63■■□□□ 1.53
VEGFA-209ENST00000425836 TRIM69Q86WT6 500 aa24.63■■□□□ 1.53
VEGFA-209ENST00000425836 CREG2Q8IUH2 290 aa24.63■■□□□ 1.53
VEGFA-209ENST00000425836 DNASE2BQ8WZ79 361 aa24.63■■□□□ 1.53
VEGFA-209ENST00000425836 OXNAD1Q96HP4 312 aaPredicted RBP24.63■■□□□ 1.53
VEGFA-209ENST00000425836 FEM1CQ96JP0 617 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms