RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 GDPD5Q8WTR4 605 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 SPOCK2Q92563 424 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 ATP2A3Q93084 1043 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 FAM167BQ9BTA0 163 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 VPS11Q9H270 941 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 RABEP2Q9H5N1 569 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 PIDD1Q9HB75 910 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 SLC17A7Q9P2U7 560 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 FCF1Q9Y324 198 aaKnown RBP15.31■□□□□ 0.04
ACTB-204ENST00000425660 PLLPQ9Y342 182 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 RAI2Q9Y5P3 530 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 MYLKQ15746 1914 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 EPOPA6NHQ4 379 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 GOLGA8TH3BQL2 631 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 TPP1O14773 563 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 SLC7A4O43246 635 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 FZD6O60353 706 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 PSMA3P25788 255 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 HADHAP40939 763 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 RGS19P49795 217 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 CSRP3P50461 194 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 AP1S1P61966 158 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 PITRM1Q5JRX3 1037 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 TMC5Q6UXY8 1006 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 GALNT7Q86SF2 657 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 TAX1BP1Q86VP1 789 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 ZC3HC1Q86WB0 502 aaKnown RBP15.31■□□□□ 0.04
ACTB-204ENST00000425660 NDUFAF2Q8N183 169 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 CELF5Q8N6W0 485 aaKnown RBP15.31■□□□□ 0.04
ACTB-204ENST00000425660 C12orf76Q8N812 135 aaPredicted RBP15.31■□□□□ 0.04
ACTB-204ENST00000425660 C2CD4AQ8NCU7 369 aaPredicted RBP15.31■□□□□ 0.04
ACTB-204ENST00000425660 LINC00597Q9H2U6 94 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 RHOJQ9H4E5 214 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 SLC28A3Q9HAS3 691 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.31■□□□□ 0.04
ACTB-204ENST00000425660 CHKBQ9Y259 395 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 HS3ST2Q9Y278 367 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 K7ERQ8 282 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 SLC9A3R1O14745 358 aaPredicted RBP15.3■□□□□ 0.04
ACTB-204ENST00000425660 ZNF821O75541 412 aaPredicted RBP15.3■□□□□ 0.04
ACTB-204ENST00000425660 TAC1P20366 129 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 GABRB3P28472 473 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 FOXN2P32314 431 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 PDE1BQ01064 536 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 PDE1CQ14123 709 aaPredicted RBP15.3■□□□□ 0.04
ACTB-204ENST00000425660 HHATQ5VTY9 493 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 NEPROQ6NW34 567 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 RNF135Q8IUD6 432 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 LMNTD2Q8IXW0 634 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 LRRC34Q8IZ02 419 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 DCLK2Q8N568 766 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 CALML6Q8TD86 181 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 ING5Q8WYH8 240 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 PTPRN2Q92932 1015 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 VPS39Q96JC1 886 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 GPR22Q99680 433 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 BBS2Q9BXC9 721 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 ADGRE3Q9BY15 652 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 PCMTD2Q9NV79 361 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 DZANK1Q9NVP4 752 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 GGT7Q9UJ14 662 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 PCDHGC4Q9Y5F7 938 aa15.3■□□□□ 0.04
ACTB-204ENST00000425660 TCP11X1B4DZS4 312 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 ANKRD66B4E2M5 251 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 NEDD8-MDP1E9PL57 170 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 SMAD6O43541 496 aaKnown RBP15.29■□□□□ 0.04
ACTB-204ENST00000425660 AHSGP02765 367 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 PDHA1P08559 390 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 TYRP14679 529 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 MAPK8P45983 427 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 SERPINB8P50452 374 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 TRAF2Q12933 501 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 THOC5Q13769 683 aaKnown RBP15.29■□□□□ 0.04
ACTB-204ENST00000425660 SEPT7Q16181 437 aaKnown RBP15.29■□□□□ 0.04
ACTB-204ENST00000425660 QPCTQ16769 361 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 TMEM184AQ6ZMB5 413 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 CPLX4Q7Z7G2 160 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 DENND6AQ8IWF6 608 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 GABPB2Q8TAK5 448 aaPredicted RBP15.29■□□□□ 0.04
ACTB-204ENST00000425660 BLOC1S5Q8TDH9 187 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 ISG20Q96AZ6 181 aaKnown RBP15.29■□□□□ 0.04
ACTB-204ENST00000425660 MRPL38Q96DV4 380 aaKnown RBP15.29■□□□□ 0.04
ACTB-204ENST00000425660 LRRC3BQ96PB8 259 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 FAM111AQ96PZ2 611 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 PAIP2Q9BPZ3 127 aaKnown RBP15.29■□□□□ 0.04
ACTB-204ENST00000425660 IQCGQ9H095 443 aaKnown RBP15.29■□□□□ 0.04
ACTB-204ENST00000425660 MFSD1Q9H3U5 465 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 SNX15Q9NRS6 342 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 SZT2Q5T011 3432 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 REV3LO60673 3130 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 ERICH4A6NGS2 130 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 VIMP08670 466 aaKnown RBP15.29■□□□□ 0.04
ACTB-204ENST00000425660 SLC1A2P43004 574 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 POLD2P49005 469 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 DMC1Q14565 340 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 INSCQ1MX18 579 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 FUT11Q495W5 492 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 LY6G5CQ5SRR4 150 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 ZNF470Q6ECI4 717 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 ASTLQ6HA08 431 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms