RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 SCYL2Q6P3W7 929 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 BRAT1Q6PJG6 821 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TRIM72Q6ZMU5 477 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 PIM3Q86V86 326 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 DNAAF5Q86Y56 855 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CCDC112Q8NEF3 446 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 FAM46DQ8NEK8 389 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 KIAA1524Q8TCG1 905 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 RXFP2Q8WXD0 754 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TSACCQ96A04 125 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 WDR92Q96MX6 357 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ZNF641Q96N77 438 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 WRAP53Q9BUR4 548 aaKnown RBP12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 STK33Q9BYT3 514 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 B3GNT4Q9C0J1 378 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 DPEP2Q9H4A9 486 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ANLNQ9NQW6 1124 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 METTL5Q9NRN9 209 aaKnown RBP12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TMPRSS4Q9NRS4 437 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TMEM59LQ9UK28 342 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ACSL6Q9UKU0 697 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ITM2BQ9Y287 266 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 LOXL2Q9Y4K0 774 aa12.39□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CFAP69A5D8W1 941 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 D6RAR5 112 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 EFSO43281 561 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 PPFIA2O75334 1257 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TMCC1O94876 653 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TIMP2P16035 220 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 PPM1FP49593 454 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 MAPK10P53779 464 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 AIF1P55008 147 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 MTM1Q13496 603 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 INPP5AQ14642 412 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CAMK4Q16566 473 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 UGP2Q16851 508 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 PARP15Q460N3 678 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ATXN7L2Q5T6C5 722 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 PHF19Q5T6S3 580 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 KLHDC7AQ5VTJ3 777 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ZNF574Q6ZN55 896 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 IRF2BP1Q8IU81 584 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CCNJLQ8IV13 435 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 Q8N9G6 341 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TP53I13Q8NBR0 393 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 PCDH19Q8TAB3 1148 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 SEMA3CQ99985 751 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 SEMA4CQ9C0C4 833 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CLPBQ9H078 707 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TCEAL2Q9H3H9 227 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 SUV39H2Q9H5I1 410 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 MBNL1Q9NR56 388 aaKnown RBP12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 LRIT1Q9P2V4 623 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 UBA2Q9UBT2 640 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 APPL1Q9UKG1 709 aa12.38□□□□□ -0.43
HLA-DQB3-203ENST00000425319 A0A1W2PQC6 194 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 RHPN2P1A8MT19 583 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 RNF103O00237 685 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TNFRSF10CO14798 259 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 DAPK3O43293 454 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 LRIG2O94898 1065 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CALB1P05937 261 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 UCHL3P15374 230 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ERCC5P28715 1186 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 SERPINA4P29622 427 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 PTPN9P43378 593 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 NSFP46459 744 aaKnown RBP12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 APBA1Q02410 837 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 IRF4Q15306 451 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CLPPQ16740 277 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 MAP9Q49MG5 647 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 FKBP15Q5T1M5 1219 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 OTUD1Q5VV17 481 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 LEKR1Q6ZMV7 388 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 EMC1Q8N766 993 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 OR56A4Q8NGH8 313 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 NTAN1Q96AB6 310 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 TUBGCP5Q96RT8 1024 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ATP13A3Q9H7F0 1226 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 SIX2Q9NPC8 291 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 GGT7Q9UJ14 662 aa12.37□□□□□ -0.43
HLA-DQB3-203ENST00000425319 A0A1W2PQ67 120 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 ARHGAP42A6NI28 874 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 I6L893 689 aaPredicted RBP12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 FGF10O15520 208 aaPredicted RBP12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 NUDT21O43809 227 aaKnown RBP12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CREB3O43889 395 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CD160O95971 181 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 PCCBP05166 539 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 MMEP08473 750 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 CCDC172P0C7W6 258 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 KRT10P13645 584 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 GPD1P21695 349 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 MAN1A1P33908 653 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 HTR7P34969 479 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 STAT1P42224 750 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 LIG3P49916 1009 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 NOMO3P69849 1222 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 BCL2L1Q07817 233 aa12.36□□□□□ -0.43
HLA-DQB3-203ENST00000425319 AGERQ15109 404 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms