RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 NSUN2Q08J23 767 aaKnown RBP eCLIP21.74■■□□□ 1.07
CDCP1-202ENST00000425231 PDE1CQ14123 709 aaPredicted RBP21.74■■□□□ 1.07
CDCP1-202ENST00000425231 RFTN1Q14699 578 aaPredicted RBP21.74■■□□□ 1.07
CDCP1-202ENST00000425231 SRLQ86TD4 932 aa21.74■■□□□ 1.07
CDCP1-202ENST00000425231 TMPRSS12Q86WS5 348 aa21.74■■□□□ 1.07
CDCP1-202ENST00000425231 OR4C6Q8NH72 309 aa21.74■■□□□ 1.07
CDCP1-202ENST00000425231 CXorf40AQ8TE69 158 aa21.74■■□□□ 1.07
CDCP1-202ENST00000425231 WRAP53Q9BUR4 548 aaKnown RBP21.74■■□□□ 1.07
CDCP1-202ENST00000425231 PCDH18Q9HCL0 1135 aa21.74■■□□□ 1.07
CDCP1-202ENST00000425231 DNAJC28Q9NX36 388 aa21.74■■□□□ 1.07
CDCP1-202ENST00000425231 KLF15Q9UIH9 416 aa21.74■■□□□ 1.07
CDCP1-202ENST00000425231 LRRK1Q38SD2 2015 aa21.73■■□□□ 1.07
CDCP1-202ENST00000425231 MUSKO15146 869 aa21.73■■□□□ 1.07
CDCP1-202ENST00000425231 TPM3P06753 285 aa21.73■■□□□ 1.07
CDCP1-202ENST00000425231 ACP1P24666 158 aa21.73■■□□□ 1.07
CDCP1-202ENST00000425231 IGFALSP35858 605 aa21.73■■□□□ 1.07
CDCP1-202ENST00000425231 EIF4A3P38919 411 aaKnown RBP21.73■■□□□ 1.07
CDCP1-202ENST00000425231 HNRNPKP61978 463 aaKnown RBP eCLIP21.73■■□□□ 1.07
CDCP1-202ENST00000425231 ELP6Q0PNE2 266 aa21.73■■□□□ 1.07
CDCP1-202ENST00000425231 BRAT1Q6PJG6 821 aa21.73■■□□□ 1.07
CDCP1-202ENST00000425231 PARGQ86W56 976 aa21.73■■□□□ 1.07
CDCP1-202ENST00000425231 TP53I13Q8NBR0 393 aaPredicted RBP21.73■■□□□ 1.07
CDCP1-202ENST00000425231 NSMCE3Q96MG7 304 aa21.73■■□□□ 1.07
CDCP1-202ENST00000425231 CINPQ9BW66 212 aaPredicted RBP21.73■■□□□ 1.07
CDCP1-202ENST00000425231 PCDH12Q9NPG4 1184 aa21.73■■□□□ 1.07
CDCP1-202ENST00000425231 MBNL1Q9NR56 388 aaKnown RBP21.73■■□□□ 1.07
CDCP1-202ENST00000425231 KNTC1P50748 2209 aa21.73■■□□□ 1.07
CDCP1-202ENST00000425231 ANKRD36A6QL64 1941 aa21.73■■□□□ 1.07
CDCP1-202ENST00000425231 MYO1FO00160 1098 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 RIOK3O14730 519 aaKnown RBP21.72■■□□□ 1.07
CDCP1-202ENST00000425231 PEX11BO96011 259 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 NME1P15531 152 aaKnown RBP21.72■■□□□ 1.07
CDCP1-202ENST00000425231 XPAP23025 273 aaPredicted RBP21.72■■□□□ 1.07
CDCP1-202ENST00000425231 CLDN6P56747 220 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 SLC10A7Q0GE19 358 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 ILKQ13418 452 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 TMCO3Q6UWJ1 677 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 PROSER1Q86XN7 944 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 ECHDC3Q96DC8 303 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 ZNF599Q96NL3 588 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 PSKH2Q96QS6 385 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 ATP13A3Q9H7F0 1226 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 TRABD2BA6NFA1 517 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 SCAMP1O15126 338 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 FFAR2O15552 330 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 IL4RP24394 825 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 EIF2B5Q13144 721 aaKnown RBP21.72■■□□□ 1.07
CDCP1-202ENST00000425231 LBRQ14739 615 aaKnown RBP21.72■■□□□ 1.07
CDCP1-202ENST00000425231 ASTE1Q2TB18 679 aaPredicted RBP21.72■■□□□ 1.07
CDCP1-202ENST00000425231 SPECC1LQ69YQ0 1117 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 FAM71BQ8TC56 605 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 DNAJC7Q99615 494 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 C1QTNF7Q9BXJ2 289 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 CCDC86Q9H6F5 360 aaKnown RBP21.72■■□□□ 1.07
CDCP1-202ENST00000425231 NLGN3Q9NZ94 848 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 COQ6Q9Y2Z9 468 aa21.72■■□□□ 1.07
CDCP1-202ENST00000425231 NEMP2A6NFY4 417 aa21.71■■□□□ 1.07
CDCP1-202ENST00000425231 MAFKO60675 156 aa21.71■■□□□ 1.07
CDCP1-202ENST00000425231 SERPINA4P29622 427 aa21.71■■□□□ 1.07
CDCP1-202ENST00000425231 SCNN1BP51168 640 aa21.71■■□□□ 1.07
CDCP1-202ENST00000425231 YPEL5P62699 121 aa21.71■■□□□ 1.07
CDCP1-202ENST00000425231 SLC18A3Q16572 532 aa21.71■■□□□ 1.07
CDCP1-202ENST00000425231 TMCO4Q5TGY1 634 aa21.71■■□□□ 1.07
CDCP1-202ENST00000425231 ZNF548Q8NEK5 533 aaPredicted RBP21.71■■□□□ 1.07
CDCP1-202ENST00000425231 OR8K1Q8NGG5 319 aa21.71■■□□□ 1.07
CDCP1-202ENST00000425231 ZNF564Q8TBZ8 553 aaPredicted RBP21.71■■□□□ 1.07
CDCP1-202ENST00000425231 MDM1Q8TC05 714 aa21.71■■□□□ 1.07
CDCP1-202ENST00000425231 SEPT3Q9UH03 358 aa21.71■■□□□ 1.07
CDCP1-202ENST00000425231 PNMA8BQ9ULN7 279 aaPredicted RBP21.71■■□□□ 1.07
CDCP1-202ENST00000425231 ATP8A1Q9Y2Q0 1164 aa21.71■■□□□ 1.07
CDCP1-202ENST00000425231 K7ESM1 405 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 TRAFD1O14545 582 aaPredicted RBP21.7■■□□□ 1.06
CDCP1-202ENST00000425231 CBFA2T2O43439 604 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 NEBLO76041 1014 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 PRKCGP05129 697 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 CD48P09326 243 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 C6P13671 934 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 MMP12P39900 470 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 LIG3P49916 1009 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 RENBPP51606 427 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 ARSEP51690 589 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 SEMG2Q02383 582 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 BCL2L1Q07817 233 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 PTK2BQ14289 1009 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 AGERQ15109 404 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 WSCD2Q2TBF2 565 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 CFAP58Q5T655 872 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 ERAP2Q6P179 960 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 CPNE8Q86YQ8 564 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 PACSIN1Q9BY11 444 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 CSNK1G3Q9Y6M4 447 aa21.7■■□□□ 1.06
CDCP1-202ENST00000425231 H3BM21 787 aa21.69■■□□□ 1.06
CDCP1-202ENST00000425231 TOR1BO14657 336 aa21.69■■□□□ 1.06
CDCP1-202ENST00000425231 JUPP14923 745 aa21.69■■□□□ 1.06
CDCP1-202ENST00000425231 JUNDP17535 347 aa21.69■■□□□ 1.06
CDCP1-202ENST00000425231 CR2P20023 1033 aa21.69■■□□□ 1.06
CDCP1-202ENST00000425231 THOP1P52888 689 aa21.69■■□□□ 1.06
CDCP1-202ENST00000425231 CDH6P55285 790 aa21.69■■□□□ 1.06
CDCP1-202ENST00000425231 MMRN1Q13201 1228 aa21.69■■□□□ 1.06
CDCP1-202ENST00000425231 TRIM14Q14142 442 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms