RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 CARM1Q86X55 608 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 CNTN4Q8IWV2 1026 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 NLGN2Q8NFZ4 835 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 DIS3LQ8TF46 1054 aaKnown RBP14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 DNAI2Q9GZS0 605 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 DUS2Q9NX74 493 aaKnown RBP14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 NUDT5Q9UKK9 219 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 FBXO5Q9UKT4 447 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 KCNH4Q9UQ05 1017 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 A0A0J9YVX5 310 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 TTC24A2A3L6 582 aaPredicted RBP14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 FAM149AA5PLN7 773 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 TRMUO75648 421 aaKnown RBP14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 KCNE1P15382 129 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 ATP6V1B2P21281 511 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 IREB2P48200 963 aaKnown RBP14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 NR1H2P55055 460 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 CTBSQ01459 385 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 TECRLQ5HYJ1 363 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 CUZD1Q86UP6 607 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 RETREG3Q86VR2 466 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 FUNDC1Q8IVP5 155 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 SLC16A10Q8TF71 515 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 UNC93B1Q9H1C4 597 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 SUCOQ9UBS9 1254 aaKnown RBP14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 CD300AQ9UGN4 299 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 TANC1Q9C0D5 1861 aa14.3□□□□□ -0.12
TPM3P9-201ENST00000424846 PDLIM1O00151 329 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 UBDO15205 165 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 STRNO43815 780 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 NPHS1O60500 1241 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 HLA-DQB2P05538 268 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 CPB1P15086 417 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 HCAR3P49019 387 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 CXCR3P49682 368 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 SLC7A2P52569 658 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 PRAMEP78395 509 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 XKR4Q5GH76 650 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 TMEM207Q6UWW9 146 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 CANT1Q8WVQ1 401 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 EMID1Q96A84 441 aaPredicted RBP14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 SENP8Q96LD8 212 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 VTA1Q9NP79 307 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 LRRC14BA6NHZ5 514 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 SAC3D1A6NKF1 404 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 TREHO43280 583 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 CACNG3O60359 315 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 FOXD2O60548 495 aaPredicted RBP14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 ALDOCP09972 364 aaKnown RBP14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 CCDC166P0CW27 439 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 CHRM3P20309 590 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 ATP5F1P24539 256 aaPredicted RBP14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 ETFBP38117 255 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 HADHAP40939 763 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 PNPLA4P41247 253 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 TXNL4AP83876 142 aaKnown RBP14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 TMEM259Q4ZIN3 620 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 PIWIL4Q7Z3Z4 852 aaKnown RBP14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 LCA5Q86VQ0 697 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 GPC2Q8N158 579 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 TOP6BLQ8N6T0 577 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 RNF34Q969K3 372 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 CDCA5Q96FF9 252 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 MRPL57Q9BQC6 102 aaKnown RBP14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 SLC39A8Q9C0K1 460 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 TCAF1Q9Y4C2 921 aa14.29□□□□□ -0.12
TPM3P9-201ENST00000424846 RBM47A0AV96 593 aaKnown RBP14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 ARHGAP10A1A4S6 786 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 HEATR9A2RTY3 570 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 MRASO14807 208 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 HTRA2O43464 458 aaPredicted RBP14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 COL6A2P12110 1019 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 SOX11P35716 441 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 CD151P48509 253 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 HK2P52789 917 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 CDH13P55290 713 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 PRPSAP1Q14558 356 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 IHHQ14623 411 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 PAN2Q504Q3 1202 aaKnown RBP14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 PM20D1Q6GTS8 502 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 PIM3Q86V86 326 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 TRIML2Q8N7C3 387 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 C2CD4AQ8NCU7 369 aaPredicted RBP14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 GLOD4Q9HC38 313 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 TREX1Q9NSU2 369 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 BCAP29Q9UHQ4 241 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 ANKRD12Q6UB98 2062 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 SCN4AP35499 1836 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 TCRBV3S1A0A5B6 114 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 TRPC5OSA6NMA1 111 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 H3BNH8 94 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 DLGAP1O14490 977 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 MTSS1O43312 755 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 MSI1O43347 362 aaKnown RBP14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 TPST1O60507 370 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 MAFKO60675 156 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 CLIC3O95833 236 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 ADRA1AP35348 466 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 GRIA3P42263 894 aa14.28□□□□□ -0.12
TPM3P9-201ENST00000424846 STT3AP46977 705 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms