RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 UPK3BL1B0FP48 263 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 PRR5-ARHGAP8B1AHC4 643 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 UPK3BL2E5RIL1 263 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 SLC31A1O15431 190 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 MTSS1O43312 755 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 TSPAN6O43657 245 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 AP1G1O43747 822 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 KIF5CO60282 957 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 PRKCGP05129 697 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 ITIH2P19823 946 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 MSNP26038 577 aaKnown RBP15.89■□□□□ 0.13
BRAT1-202ENST00000421712 HOXD11P31277 338 aaPredicted RBP15.89■□□□□ 0.13
BRAT1-202ENST00000421712 HOXD12P35452 270 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 SUOXP51687 545 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 RPS21P63220 83 aaKnown RBP15.89■□□□□ 0.13
BRAT1-202ENST00000421712 FAM193AP78312 1265 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 ELP6Q0PNE2 266 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 SGCGQ13326 291 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 XRCC4Q13426 336 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 PRKD1Q15139 912 aaPredicted RBP15.89■□□□□ 0.13
BRAT1-202ENST00000421712 NOMO1Q15155 1222 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 AASDHQ4L235 1098 aaPredicted RBP15.89■□□□□ 0.13
BRAT1-202ENST00000421712 SETMARQ53H47 684 aaPredicted RBP15.89■□□□□ 0.13
BRAT1-202ENST00000421712 SLC45A4Q5BKX6 768 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 PLA2G2CQ5R387 149 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 ARMC12Q5T9G4 340 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 TCEAL6Q6IPX3 200 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 PRR23CQ6ZRP0 262 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 TRIM69Q86WT6 500 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 HORMAD1Q86X24 394 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 TTC13Q8NBP0 860 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 TCEAL3Q969E4 200 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 VOPP1Q96AW1 172 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 SERAC1Q96JX3 654 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 PCDH12Q9NPG4 1184 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 AASDHPPTQ9NRN7 309 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 ATP8A1Q9Y2Q0 1164 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 PCDHB9Q9Y5E1 797 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 RAI2Q9Y5P3 530 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.89■□□□□ 0.13
BRAT1-202ENST00000421712 ANKRD36A6QL64 1941 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 PI4KAP42356 2102 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 A0A1W2PQ67 120 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 FOXD2O60548 495 aaPredicted RBP15.88■□□□□ 0.13
BRAT1-202ENST00000421712 SOCS5O75159 536 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 SERPINF2P08697 491 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 PRLRP16471 622 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 CA4P22748 312 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 NFKBIAP25963 317 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 CD86P42081 329 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 ATXN3P54252 364 aaPredicted RBP15.88■□□□□ 0.13
BRAT1-202ENST00000421712 EPHB1P54762 984 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 IRX4P78413 519 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 SEMG2Q02383 582 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 TRAF2Q12933 501 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 TEAD4Q15561 434 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 TEX44Q53QW1 395 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 SEL1L3Q68CR1 1132 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 KIAA1161Q6NSJ0 714 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 PID1Q7Z2X4 250 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 CDKL3Q8IVW4 592 aaPredicted RBP15.88■□□□□ 0.13
BRAT1-202ENST00000421712 NDUFAF2Q8N183 169 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 CNTD1Q8N815 330 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 HTR3CQ8WXA8 447 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 NSMCE3Q96MG7 304 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 QKIQ96PU8 341 aaKnown RBP eCLIP15.88■□□□□ 0.13
BRAT1-202ENST00000421712 WRAP53Q9BUR4 548 aaKnown RBP15.88■□□□□ 0.13
BRAT1-202ENST00000421712 C10orf88Q9H8K7 445 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 TM9SF3Q9HD45 589 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 FSCN3Q9NQT6 498 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 KLHL8Q9P2G9 620 aaPredicted RBP15.88■□□□□ 0.13
BRAT1-202ENST00000421712 GGT7Q9UJ14 662 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 PYCARDQ9ULZ3 195 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 SLC6A14Q9UN76 642 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 RIF1Q5UIP0 2472 aaKnown RBP15.88■□□□□ 0.13
BRAT1-202ENST00000421712 DMDP11532 3685 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 OTOGLQ3ZCN5 2332 aa15.88■□□□□ 0.13
BRAT1-202ENST00000421712 EP300Q09472 2414 aaPredicted RBP15.87■□□□□ 0.13
BRAT1-202ENST00000421712 TRPM6Q9BX84 2022 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 TSPAN11A1L157 253 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 IGLON5A6NGN9 336 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 A8MX80 341 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 TRAFD1O14545 582 aaPredicted RBP15.87■□□□□ 0.13
BRAT1-202ENST00000421712 ENC1O14682 589 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 MMP20O60882 483 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 STK10O94804 968 aaKnown RBP15.87■□□□□ 0.13
BRAT1-202ENST00000421712 PAK4O96013 591 aaPredicted RBP15.87■□□□□ 0.13
BRAT1-202ENST00000421712 CPP00450 1065 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 RBP3P10745 1247 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 TGM1P22735 817 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 PTPN3P26045 913 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 RBL1P28749 1068 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 NUDT1P36639 197 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 CSNK1EP49674 416 aaKnown RBP15.87■□□□□ 0.13
BRAT1-202ENST00000421712 AFF3P51826 1226 aaKnown RBP15.87■□□□□ 0.13
BRAT1-202ENST00000421712 NIPAL4Q0D2K0 466 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 STAT4Q14765 748 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 ZNF284Q2VY69 593 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 PEAR1Q5VY43 1037 aaPredicted RBP15.87■□□□□ 0.13
BRAT1-202ENST00000421712 SLC23A3Q6PIS1 610 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms