RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.76■□□□□ 0.27
PKP4-204ENST00000421462 NME7Q9Y5B8 376 aa16.76■□□□□ 0.27
PKP4-204ENST00000421462 UBR3Q6ZT12 1888 aa16.76■□□□□ 0.27
PKP4-204ENST00000421462 A0A087WZ62 844 aa16.76■□□□□ 0.27
PKP4-204ENST00000421462 ZNF24P17028 368 aa16.76■□□□□ 0.27
PKP4-204ENST00000421462 PSMA4P25789 261 aaKnown RBP16.76■□□□□ 0.27
PKP4-204ENST00000421462 IREB2P48200 963 aaKnown RBP16.76■□□□□ 0.27
PKP4-204ENST00000421462 IGFN1Q86VF2 1251 aa16.76■□□□□ 0.27
PKP4-204ENST00000421462 RETREG3Q86VR2 466 aa16.76■□□□□ 0.27
PKP4-204ENST00000421462 RYBPQ8N488 228 aaPredicted RBP16.76■□□□□ 0.27
PKP4-204ENST00000421462 SPATA22Q8NHS9 363 aa16.76■□□□□ 0.27
PKP4-204ENST00000421462 CASP10Q92851 521 aa16.76■□□□□ 0.27
PKP4-204ENST00000421462 HDAC10Q969S8 669 aa16.76■□□□□ 0.27
PKP4-204ENST00000421462 HNRNPABQ99729 332 aaKnown RBP16.76■□□□□ 0.27
PKP4-204ENST00000421462 FDXACB1Q9BRP7 624 aaPredicted RBP16.76■□□□□ 0.27
PKP4-204ENST00000421462 HERC2P3Q9BVR0 1158 aa16.76■□□□□ 0.27
PKP4-204ENST00000421462 ING2Q9H160 280 aa16.76■□□□□ 0.27
PKP4-204ENST00000421462 MRPL40Q9NQ50 206 aaKnown RBP16.76■□□□□ 0.27
PKP4-204ENST00000421462 NME4O00746 187 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 AURKAO14965 403 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 E2F6O75461 281 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 GJA8P48165 433 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 TAS2R39P59534 338 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 CBLBQ13191 982 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 MAPK11Q15759 364 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 ZNF618Q5T7W0 954 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 TMEM110Q86TL2 294 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 TTC16Q8NEE8 873 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 ZC3H15Q8WU90 426 aaKnown RBP16.75■□□□□ 0.27
PKP4-204ENST00000421462 SEPT1Q8WYJ6 367 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 TEX13BQ9BXU2 312 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 KLHL25Q9H0H3 589 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 UTP6Q9NYH9 597 aaKnown RBP16.75■□□□□ 0.27
PKP4-204ENST00000421462 SCN1AP35498 2009 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 ZFC3H1O60293 1989 aaKnown RBP16.75■□□□□ 0.27
PKP4-204ENST00000421462 HACD1B0YJ81 288 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 SUPT7LO94864 414 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 OXSR1O95747 527 aaPredicted RBP16.75■□□□□ 0.27
PKP4-204ENST00000421462 AP2A1O95782 977 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 VTNP04004 478 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 MYF6P23409 242 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 ADSLP30566 484 aaPredicted RBP16.75■□□□□ 0.27
PKP4-204ENST00000421462 STX1BP61266 288 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 RBP5P82980 135 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 DNASE1L3Q13609 305 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 SPIDRQ14159 915 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 MAPRE2Q15555 327 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 PGS1Q32NB8 556 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 CUZD1Q86UP6 607 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 MFSD6LQ8IWD5 586 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 MLPHQ9BV36 600 aaPredicted RBP16.75■□□□□ 0.27
PKP4-204ENST00000421462 MRPL46Q9H2W6 279 aaKnown RBP16.75■□□□□ 0.27
PKP4-204ENST00000421462 CDHR5Q9HBB8 845 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 PKD2L2Q9NZM6 624 aa16.75■□□□□ 0.27
PKP4-204ENST00000421462 IFT80Q9P2H3 777 aaPredicted RBP16.75■□□□□ 0.27
PKP4-204ENST00000421462 ZBBXA8MT70 800 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 H0YJX3 145 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 RAD23AP54725 363 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 LSM3P62310 102 aaKnown RBP16.74■□□□□ 0.27
PKP4-204ENST00000421462 LAMC2Q13753 1193 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 SQLEQ14534 574 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 MOGQ16653 247 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 CTU1Q7Z7A3 348 aaKnown RBP16.74■□□□□ 0.27
PKP4-204ENST00000421462 ANKFN1Q8N957 763 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 IPMKQ8NFU5 416 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 GPR22Q99680 433 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 BRD8Q9H0E9 1235 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 CD300AQ9UGN4 299 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 SLC2A6Q9UGQ3 507 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 KRBA1A5PL33 1030 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 SLC22A2O15244 555 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 BMP2P12643 396 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 ERCC2P18074 760 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 PROZP22891 400 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 JAK1P23458 1154 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 LMO2P25791 158 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 BAG6P46379 1132 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 ZBTB17Q13105 803 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 INPP5AQ14642 412 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 FBXO48Q5FWF7 155 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 ESRP1Q6NXG1 681 aaKnown RBP16.74■□□□□ 0.27
PKP4-204ENST00000421462 GLT1D1Q96MS3 346 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 SLC25A23Q9BV35 468 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 C2orf40Q9H1Z8 148 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 RHOJQ9H4E5 214 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 LTB4R2Q9NPC1 389 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 EIF2B3Q9NR50 452 aaKnown RBP16.74■□□□□ 0.27
PKP4-204ENST00000421462 AKT3Q9Y243 479 aa16.74■□□□□ 0.27
PKP4-204ENST00000421462 LSM1O15116 133 aaKnown RBP16.73■□□□□ 0.27
PKP4-204ENST00000421462 MT-CYBP00156 380 aaPredicted RBP16.73■□□□□ 0.27
PKP4-204ENST00000421462 PCNAP12004 261 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 NDUFV1P49821 464 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 APLP1P51693 650 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 RAB10P61026 200 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 ADIGQ0VDE8 80 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 ARHGAP17Q68EM7 881 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 RAVER1Q8IY67 606 aaKnown RBP16.73■□□□□ 0.27
PKP4-204ENST00000421462 COPS5Q92905 334 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 BEGAINQ9BUH8 593 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 POLE4Q9NR33 117 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms