RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 FAM182AQ5T1J6 154 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 TRIM67Q6ZTA4 783 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 C3orf62Q6ZUJ4 267 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 TDRPQ86YL5 185 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 IGDCC3Q8IVU1 814 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 PALM2Q8IXS6 379 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 OR2A12Q8NGT7 310 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 UBLCP1Q8WVY7 318 aaPredicted RBP14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 IFT43Q96FT9 208 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 C9orf72Q96LT7 481 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 CCDC77Q9BR77 488 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 FICDQ9BVA6 458 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 KCNH6Q9H252 994 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 TRABDQ9H4I3 376 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 ATP13A3Q9H7F0 1226 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 PLAC1Q9HBJ0 212 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 FAM53CQ9NYF3 392 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 UBP1Q9NZI7 540 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 THAP10Q9P2Z0 257 aaPredicted RBP14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 ZC3H7BQ9UGR2 993 aaKnown RBP14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 SLCO3A1Q9UIG8 710 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 RAI2Q9Y5P3 530 aa14.39□□□□□ -0.11
SHMT1P1-201ENST00000419974 KIAA1549LQ6ZVL6 1849 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 TSPAN11A1L157 253 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 HEATR9A2RTY3 570 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 MROH6A6NGR9 719 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 ANKRD66B4E2M5 251 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 AGPSO00116 658 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 CPP00450 1065 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 C1QAP02745 245 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 APODP05090 189 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 POLBP06746 335 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 SERPINA4P29622 427 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 STX2P32856 288 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 GRIA4P48058 902 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 STK19P49842 368 aaPredicted RBP14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 ST8SIA6P61647 398 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 BCL2L1Q07817 233 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 NAB1Q13506 487 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 SPANXN3Q5MJ09 141 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 SYCP2LQ5T4T6 812 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 PKN3Q6P5Z2 889 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 GSDMBQ8TAX9 411 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 BRSK1Q8TDC3 778 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 RPL10LQ96L21 214 aaKnown RBP14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 ZIM3Q96PE6 472 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 LYSMD1Q96S90 227 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 OSBPL1AQ9BXW6 950 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 ACSS3Q9H6R3 686 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 HACD3Q9P035 362 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 DKK3Q9UBP4 350 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 FAM169AQ9Y6X4 670 aa14.38□□□□□ -0.11
SHMT1P1-201ENST00000419974 SHROOM3Q8TF72 1996 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 TECTAO75443 2155 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 USP12O75317 370 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 PGLSO95336 258 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 CHRM1P11229 460 aaPredicted RBP14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 MGAT1P26572 445 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 CTHP32929 405 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 SESN2P58004 480 aaPredicted RBP14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 ACVR1Q04771 509 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 MESP2Q0VG99 397 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 KLHL38Q2WGJ6 581 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 HNRNPA1L2Q32P51 320 aaKnown RBP14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 ARMC12Q5T9G4 340 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 UNC5AQ6ZN44 842 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 RAVER1Q8IY67 606 aaKnown RBP14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 RIBC1Q8N443 379 aaPredicted RBP14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 PIH1D2Q8WWB5 315 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 SCG3Q8WXD2 468 aaKnown RBP14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 PTPRN2Q92932 1015 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 SGSM3Q96HU1 749 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 CIPCQ9C0C6 399 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 MAGEE1Q9HCI5 957 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 MED4Q9NPJ6 270 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 SYBUQ9NX95 663 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 SAMD15Q9P1V8 674 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 LIMD1Q9UGP4 676 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 SLC24A2Q9UI40 661 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 RABGEF1Q9UJ41 708 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 PLAAQ9Y263 795 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 TCAF1Q9Y4C2 921 aa14.37□□□□□ -0.11
SHMT1P1-201ENST00000419974 COL4A2P08572 1712 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 EDDM13A0A1B0GTR0 161 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 ZCWPW2A0A1B0GU75 182 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 TCRBV9S1A1TA0A576 114 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 TBC1D3BA6NDS4 549 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 SPECC1L-ADORA2AF8WAN1 911 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 ACSL3O95573 720 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 IVLP07476 585 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 SRFP11831 508 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 DRD1P21728 446 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 RECQLP46063 649 aaPredicted RBP14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 GALK1P51570 392 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 CCNHP51946 323 aaPredicted RBP14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 PDE1BQ01064 536 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 SIGLEC14Q08ET2 396 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 ILF2Q12905 390 aaKnown RBP14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 TRAF2Q12933 501 aa14.36□□□□□ -0.11
SHMT1P1-201ENST00000419974 TDGQ13569 410 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms