RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 MMP20O60882 483 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 SDC3O75056 442 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 TOP3BO95985 862 aaKnown RBP12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 TIMP2P16035 220 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 IL4RP24394 825 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 MMP13P45452 471 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 RABIFP47224 123 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 ZNF75DP51815 510 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 TAS2R40P59535 323 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 POLR2LP62875 67 aaKnown RBP12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 SHBQ15464 509 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 ATP13A4Q4VNC1 1196 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 HS1BP3Q53T59 392 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 ODF2Q5BJF6 829 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 ANKRD20A8PQ5CZ79 823 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 MARC1Q5VT66 337 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 NCBP2-AS2Q69YL0 99 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 DCP2Q8IU60 420 aaKnown RBP12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 LRRC49Q8IUZ0 686 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 SLC22A18ASQ8N1D0 253 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 PNPLA1Q8N8W4 532 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 TC2NQ8N9U0 490 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 ASB12Q8WXK4 309 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 LENG8Q96PV6 779 aaPredicted RBP12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 RBSNQ9H1K0 784 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 PCDH12Q9NPG4 1184 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 SCUBE2Q9NQ36 999 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 HAUS2Q9NVX0 235 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 INTUQ9ULD6 942 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 ATP8A1Q9Y2Q0 1164 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 HS3ST3A1Q9Y663 406 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 LRRD1A4D1F6 860 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 POM121BA6NF01 834 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 BUB1BO60566 1050 aaPredicted RBP12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 NEBLO76041 1014 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 MTA2O94776 668 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 LDOC1O95751 146 aaPredicted RBP12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 ITIH2P19823 946 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 CYLC1P35663 651 aaPredicted RBP12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 MMP12P39900 470 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 ARSEP51690 589 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 THOP1P52888 689 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 BNIP3Q12983 259 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 PDE1CQ14123 709 aaPredicted RBP12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 PAFAH1B3Q15102 231 aaKnown RBP12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 CCDC157Q569K6 752 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 TIGD7Q6NT04 549 aaPredicted RBP12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 PARGQ86W56 976 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 CHCHD4Q8N4Q1 142 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 EID2Q8N6I1 236 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 PCDH19Q8TAB3 1148 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 PDCD6IPQ8WUM4 868 aaKnown RBP12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 ADAMTS14Q8WXS8 1223 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 MRFAP1L1Q96HT8 127 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 CNDP2Q96KP4 475 aaKnown RBP12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 ZNF830Q96NB3 372 aaPredicted RBP12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 KLF6Q99612 283 aaPredicted RBP12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 MGME1Q9BQP7 344 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 LUC7LQ9NQ29 371 aaKnown RBP12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 DNAJC28Q9NX36 388 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 NEUROG3Q9Y4Z2 214 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 WDFY3Q8IZQ1 3526 aa12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 COL5A1P20908 1838 aaPredicted RBP12.83□□□□□ -0.36
HMGN1P4-201ENST00000419500 A0A1W2PQ67 120 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 H3BM21 787 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 ENC1O14682 589 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 RIOK3O14730 519 aaKnown RBP12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 SPOPO43791 374 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 SOCS5O75159 536 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 IPO7O95373 1038 aaKnown RBP12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 MAP3K6O95382 1288 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 PEX11BO96011 259 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 PRKCGP05129 697 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 ATXN1LP0C7T5 689 aaKnown RBP12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 ALPPL2P10696 532 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 C6P13671 934 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 MX2P20592 715 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 NFKBIAP25963 317 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 GARSP41250 739 aaKnown RBP12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 LIG3P49916 1009 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 MAXP61244 160 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 HNRNPKP61978 463 aaKnown RBP eCLIP12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 ITKQ08881 620 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 GALNT2Q10471 571 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 PTK2BQ14289 1009 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 SPA17Q15506 151 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 TMEM52BQ4KMG9 183 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 RAB44Q7Z6P3 723 aaPredicted RBP12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 SLCO6A1Q86UG4 719 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 ZSWIM9Q86XI8 627 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 CCDC170Q8IYT3 715 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 ECHDC3Q96DC8 303 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 IFT43Q96FT9 208 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 BMFQ96LC9 184 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 NUDCD1Q96RS6 583 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 POLR1EQ9GZS1 481 aaKnown RBP12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 KLK13Q9UKR3 277 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 WASF3Q9UPY6 502 aa12.82□□□□□ -0.36
HMGN1P4-201ENST00000419500 COQ6Q9Y2Z9 468 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms