RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 MAFKO60675 156 aa16.62■□□□□ 0.25
LINC00404-201ENST00000418660 C1SP09871 688 aa16.62■□□□□ 0.25
LINC00404-201ENST00000418660 TMEM253P0C7T8 217 aa16.62■□□□□ 0.25
LINC00404-201ENST00000418660 DGKAP23743 735 aa16.62■□□□□ 0.25
LINC00404-201ENST00000418660 ARSEP51690 589 aa16.62■□□□□ 0.25
LINC00404-201ENST00000418660 ADKP55263 362 aaKnown RBP16.62■□□□□ 0.25
LINC00404-201ENST00000418660 PFN3P60673 137 aa16.62■□□□□ 0.25
LINC00404-201ENST00000418660 BCL2L1Q07817 233 aa16.62■□□□□ 0.25
LINC00404-201ENST00000418660 SLC10A7Q0GE19 358 aa16.62■□□□□ 0.25
LINC00404-201ENST00000418660 FZD2Q14332 565 aa16.62■□□□□ 0.25
LINC00404-201ENST00000418660 ERAP2Q6P179 960 aa16.62■□□□□ 0.25
LINC00404-201ENST00000418660 KDF1Q8NAX2 398 aaPredicted RBP16.62■□□□□ 0.25
LINC00404-201ENST00000418660 WRAP53Q9BUR4 548 aaKnown RBP16.62■□□□□ 0.25
LINC00404-201ENST00000418660 PCDH12Q9NPG4 1184 aa16.62■□□□□ 0.25
LINC00404-201ENST00000418660 TRPM6Q9BX84 2022 aa16.62■□□□□ 0.25
LINC00404-201ENST00000418660 CEP295Q9C0D2 2601 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 RIOK3O14730 519 aaKnown RBP16.61■□□□□ 0.25
LINC00404-201ENST00000418660 MUSKO15146 869 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 PIAS2O75928 621 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 PEX11BO96011 259 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 CD48P09326 243 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 CDK4P11802 303 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 HSPA9P38646 679 aaKnown RBP16.61■□□□□ 0.25
LINC00404-201ENST00000418660 SCNN1BP51168 640 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 AP1S1P61966 158 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 DNAJC3Q13217 504 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 ZNF211Q13398 564 aaPredicted RBP16.61■□□□□ 0.25
LINC00404-201ENST00000418660 ATP13A4Q4VNC1 1196 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 CCDC157Q569K6 752 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 SARM1Q6SZW1 724 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 ZSWIM9Q86XI8 627 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 CPNE8Q86YQ8 564 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 LRRC49Q8IUZ0 686 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 CNGA4Q8IV77 575 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 GALNT15Q8N3T1 639 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 ATPAF2Q8N5M1 289 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 ECHDC3Q96DC8 303 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 CCDC42Q96M95 316 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 NHEJ1Q9H9Q4 299 aaPredicted RBP16.61■□□□□ 0.25
LINC00404-201ENST00000418660 UCKL1Q9NWZ5 548 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 DNAJC28Q9NX36 388 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 ATP8A1Q9Y2Q0 1164 aa16.61■□□□□ 0.25
LINC00404-201ENST00000418660 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.6■□□□□ 0.25
LINC00404-201ENST00000418660 CFAP69A5D8W1 941 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 TRIM38O00635 465 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 TOR1BO14657 336 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 CSF2P04141 144 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 KRT7P08729 469 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 CKMT2P17540 419 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 MAN1A1P33908 653 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 IGFALSP35858 605 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 ACADVLP49748 655 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 TAS2R40P59535 323 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 HNRNPKP61978 463 aaKnown RBP eCLIP16.6■□□□□ 0.25
LINC00404-201ENST00000418660 YPEL5P62699 121 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 POLR2LP62875 67 aaKnown RBP16.6■□□□□ 0.25
LINC00404-201ENST00000418660 MMRN1Q13201 1228 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 TBX2Q13207 712 aaPredicted RBP16.6■□□□□ 0.25
LINC00404-201ENST00000418660 PDE1CQ14123 709 aaPredicted RBP16.6■□□□□ 0.25
LINC00404-201ENST00000418660 DPYSL3Q14195 570 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 ZNF235Q14590 738 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 PDK2Q15119 407 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 SMAD1Q15797 465 aaKnown RBP16.6■□□□□ 0.25
LINC00404-201ENST00000418660 HS1BP3Q53T59 392 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 ZNF542PQ5EBM4 170 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 DHRS13Q6UX07 377 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 PARGQ86W56 976 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 BBS5Q8N3I7 341 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 TP53I13Q8NBR0 393 aaPredicted RBP16.6■□□□□ 0.25
LINC00404-201ENST00000418660 KCTD6Q8NC69 237 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 OR4C6Q8NH72 309 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 NSMCE1Q8WV22 266 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 MBNL1Q9NR56 388 aaKnown RBP16.6■□□□□ 0.25
LINC00404-201ENST00000418660 SPTLC3Q9NUV7 552 aa16.6■□□□□ 0.25
LINC00404-201ENST00000418660 NEMP2A6NFY4 417 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 AKR1B15C9JRZ8 316 aaPredicted RBP16.59■□□□□ 0.25
LINC00404-201ENST00000418660 H3BM21 787 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 TRAFD1O14545 582 aaPredicted RBP16.59■□□□□ 0.25
LINC00404-201ENST00000418660 SIGLEC6O43699 453 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 RFPL3O75679 317 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 C6P13671 934 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 NME1P15531 152 aaKnown RBP16.59■□□□□ 0.25
LINC00404-201ENST00000418660 CR2P20023 1033 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 GJC1P36383 396 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 MMP12P39900 470 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 THOP1P52888 689 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 ILKQ13418 452 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 PTK2BQ14289 1009 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 LRRC14Q15048 493 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 PAFAH1B3Q15102 231 aaKnown RBP16.59■□□□□ 0.25
LINC00404-201ENST00000418660 AGERQ15109 404 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 PROX2Q3B8N5 592 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 ANKRD20A8PQ5CZ79 823 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 TPRG1LQ5T0D9 272 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 MARC1Q5VT66 337 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 KDM7AQ6ZMT4 941 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 MAP7D3Q8IWC1 876 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 PGBD5Q8N414 524 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 PAF1Q8N7H5 531 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 PCDH19Q8TAB3 1148 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms