RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 H3BNX3 289 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CLGNO14967 610 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CRCPO75575 148 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 FKBP1BP68106 108 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SATB1Q01826 763 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TUSC3Q13454 348 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SQLEQ14534 574 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 RBM20Q5T481 1227 aaKnown RBP11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 FAM171BQ6P995 826 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 RANBP10Q6VN20 620 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 BHLHA9Q7RTU4 235 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CCDC117Q8IWD4 279 aaPredicted RBP11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 LSMEM2Q8N112 164 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 FAM156AQ8NDB6 213 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MRGPRX2Q96LB1 330 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SUDS3Q9H7L9 328 aaPredicted RBP11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TMLHEQ9NVH6 421 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PADI3Q9ULW8 664 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 AP4B1Q9Y6B7 739 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CACNG3O60359 315 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 DNAJB13P59910 316 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 EML3Q32P44 896 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 NOMO2Q5JPE7 1267 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MORN1Q5T089 497 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 DENND5AQ6IQ26 1287 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 EP400NLQ6ZTU2 488 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 RSPH1Q8WYR4 309 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TMEM209Q96SK2 561 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ALG9Q9H6U8 611 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 VPS45Q9NRW7 570 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 NDFIP2Q9NV92 336 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 APPL1Q9UKG1 709 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SDHDO14521 159 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ATP6V1B1P15313 513 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ETFBP38117 255 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CNPY1Q3B7I2 92 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SLC39A12Q504Y0 691 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TSTD2Q5T7W7 516 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 HECTD2Q5U5R9 776 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 FOXB2Q5VYV0 432 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ZNF280DQ6N043 979 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ISLR2Q6UXK2 745 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 BEND5Q7L4P6 421 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TMEM151AQ8N4L1 468 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 OR10T2Q8NGX3 314 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ZFAND2BQ8WV99 257 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 KLHL5Q96PQ7 755 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ADAM2Q99965 735 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MCMBPQ9BTE3 642 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SLC25A23Q9BV35 468 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 VPS28Q9UK41 221 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 RAB26Q9ULW5 256 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 HS3ST4Q9Y661 456 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SHROOM3Q8TF72 1996 aa11.77□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SMIM31A0A1B0GVY4 71 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 A0A1W2PQH9 124 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 BCAS2O75934 225 aaPredicted RBP11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 TNFAIP8O95379 198 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 TBX4P57082 545 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 RFTN1Q14699 578 aaPredicted RBP11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 PSMD5Q16401 504 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 IYDQ6PHW0 289 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 LRRTM3Q86VH5 581 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 PCYOX1LQ8NBM8 494 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 HDAC10Q969S8 669 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 PBXIP1Q96AQ6 731 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 CCDC68Q9H2F9 335 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 RGS18Q9NS28 235 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 CRYL1Q9Y2S2 319 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 A8MT66 165 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 MRASO14807 208 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 AURKAO14965 403 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 SRP72O76094 671 aaKnown RBP11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 SNRPB2P08579 225 aaKnown RBP11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 ARNTP27540 789 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 MLLT6P55198 1093 aaPredicted RBP11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 MS4A2Q01362 244 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 ACAP2Q15057 778 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 DCP1BQ8IZD4 617 aaKnown RBP11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 RTP3Q9BQQ7 232 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 TRMOQ9BU70 441 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 SPAG4Q9NPE6 437 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 TREX1Q9NSU2 369 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 UTP6Q9NYH9 597 aaKnown RBP11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 TRAF6Q9Y4K3 522 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 AP4S1Q9Y587 144 aa11.77□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 ATP6AP2A0A1C7CYW4 349 aa11.76□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 TARM1B6A8C7 271 aa11.76□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 DUSP11O75319 330 aaKnown RBP11.76□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 ATP6AP2O75787 350 aa11.76□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 RPLP2P05387 115 aaKnown RBP11.76□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 OR4Q2P0C623 313 aa11.76□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 SULT2A1Q06520 285 aa11.76□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 EFEMP1Q12805 493 aa11.76□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 KRT80Q6KB66 452 aa11.76□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 GDF6Q6KF10 455 aaPredicted RBP11.76□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 MON1AQ86VX9 555 aa11.76□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 MIB1Q86YT6 1006 aa11.76□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 TMEM126BQ8IUX1 230 aa11.76□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 MFSD6LQ8IWD5 586 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms