RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 FCRL3Q96P31 734 aaPredicted RBP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SP140LQ9H930 580 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 PCDHGA3Q9Y5H0 932 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 ZFC3H1O60293 1989 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 A0A0A0MRY4 1105 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 TTC24A2A3L6 582 aaPredicted RBP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 ZNF487B1APH4 448 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 F5H423 210 aaPredicted RBP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 TIMM44O43615 452 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 BMP4P12644 408 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 OXTRP30559 389 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 CSRP3P50461 194 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 CTF1Q16619 201 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 CA9Q16790 459 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 BSPRYQ5W0U4 402 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 DCP2Q8IU60 420 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 KIAA2013Q8IYS2 634 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SPARTQ8N0X7 666 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SPPL2BQ8TCT7 592 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 ROPN1LQ96C74 230 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SPATA13Q96N96 652 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 AGAP2Q99490 1192 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 IL12RB2Q99665 862 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SNRNP25Q9BV90 132 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 TARS2Q9BW92 718 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 C1QTNF1Q9BXJ1 281 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 IDI2Q9BXS1 227 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SNX25Q9H3E2 840 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 PCDH12Q9NPG4 1184 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 WARS2Q9UGM6 360 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 TARM1B6A8C7 271 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 RNF103O00237 685 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 CYP2F1P24903 491 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 CXCR2P25025 360 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 HTR1BP28222 390 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 CRKP46108 304 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 NR2C2P49116 596 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SCYL2Q6P3W7 929 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 AGMOQ6ZNB7 445 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 BRSK2Q8IWQ3 736 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 HACE1Q8IYU2 909 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SCML4Q8N228 414 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 LEMD2Q8NC56 503 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 CXorf38Q8TB03 319 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 TP53INP1Q96A56 240 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 ZDHHC15Q96MV8 337 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 MUS81Q96NY9 551 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 TBCBQ99426 244 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 MARCH7Q9H992 704 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 POLE4Q9NR33 117 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 ABCD2Q9UBJ2 740 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 FBXO40Q9UH90 709 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 ZNF229Q9UJW7 825 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 ANKRD6Q9Y2G4 727 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 TESMINQ9Y4I5 508 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 NME4O00746 187 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 TOR1BO14657 336 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 UBDO15205 165 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 SCO2O43819 266 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 GPIP06744 558 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 F7P08709 466 aaPredicted RBP8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 ENDOUP21128 410 aaKnown RBP8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 CRHBPP24387 322 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 RFC2P35250 354 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 ABCG1P45844 678 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 ILF2Q12905 390 aaKnown RBP8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 SKIV2LQ15477 1246 aaKnown RBP8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 ZNF699Q32M78 642 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 RBM48Q5RL73 367 aaKnown RBP8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 TAS2R42Q7RTR8 314 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 C14orf80Q86SX3 495 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 C11orf74Q86VG3 221 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 LRRC49Q8IUZ0 686 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 LACC1Q8IV20 430 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 COLGALT1Q8NBJ5 622 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 ACVR1CQ8NER5 493 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 ANKK1Q8NFD2 765 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 RDM1Q8NG50 284 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 HTR3CQ8WXA8 447 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 C17orf80Q9BSJ5 609 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 TRIT1Q9H3H1 467 aaKnown RBP8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 NEK6Q9HC98 313 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 RAVER2Q9HCJ3 691 aaKnown RBP8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 INTS10Q9NVR2 710 aaKnown RBP8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 ACTR3BQ9P1U1 418 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 ZNF639Q9UID6 485 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 PCDHGA11Q9Y5H2 935 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 FAM172BPA6NC97 362 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 AREL1O15033 823 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 RIMBP2O15034 1052 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 MDM4O15151 490 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 ASNA1O43681 348 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 NPHS1O60500 1241 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 HSD17B1P14061 328 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 BNIP2Q12982 314 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 GRM1Q13255 1194 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 AASDHQ4L235 1098 aaPredicted RBP8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 BTBD8Q5XKL5 378 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms